RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 RUSC1-AS1Q66K80 236 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 C9orf139Q6ZV77 190 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 OR10A7Q8NGE5 316 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 OR5H6Q8NGV6 325 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 NDNFQ8TB73 568 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF418Q8TF45 676 aaPredicted RBP8.89□□□□□ -0.99
VPS13D-210ENST00000489961 C22orf15Q8WYQ4 148 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 AP3S1Q92572 193 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 ARL11Q969Q4 196 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 SUCNR1Q9BXA5 334 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 TMEM133Q9H2Q1 129 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 IDI2-AS1Q9NZ38 188 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 KCNIP1Q9NZI2 227 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 AK3Q9UIJ7 227 aa8.89□□□□□ -0.99
VPS13D-210ENST00000489961 A0A075B6Q4 140 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 A0A1W2PRD5 423 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 A0A1W2PRF3 423 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 A0A1W2PRM7 423 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 CCDC160A6NGH7 325 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 NPFFO15130 113 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 SPINT2O43291 252 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 MMP23AO75900 390 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 CD3GP09693 182 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 HIST1H1DP16402 221 aaKnown RBP8.88□□□□□ -0.99
VPS13D-210ENST00000489961 OMGP23515 440 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 NFYBP25208 207 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 SSTR5P35346 364 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 SOX6P35712 828 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 LGALS4P56470 323 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 DYNC1I2Q13409 638 aaKnown RBP8.88□□□□□ -0.99
VPS13D-210ENST00000489961 MOGAT2Q3SYC2 334 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 MIDNQ504T8 468 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 HCP5Q6MZN7 132 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 RBMS3Q6XE24 437 aaKnown RBP8.88□□□□□ -0.99
VPS13D-210ENST00000489961 MOB1BQ7L9L4 216 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF554Q86TJ5 538 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 RTN4RL2Q86UN3 420 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 BCL6BQ8N143 479 aaPredicted RBP8.88□□□□□ -0.99
VPS13D-210ENST00000489961 PNKDQ8N490 385 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 SETD6Q8TBK2 473 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 MRPL30Q8TCC3 161 aaKnown RBP8.88□□□□□ -0.99
VPS13D-210ENST00000489961 ACOT12Q8WYK0 555 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 ISOC1Q96CN7 298 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 SLC6A7Q99884 636 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 CMSS1Q9BQ75 279 aaKnown RBP8.88□□□□□ -0.99
VPS13D-210ENST00000489961 LINC00574Q9H8X3 128 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 C12orf4Q9NQ89 552 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 MBNL3Q9NUK0 354 aaKnown RBP8.88□□□□□ -0.99
VPS13D-210ENST00000489961 MGAT4AQ9UM21 535 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 NAV3Q8IVL0 2385 aa8.88□□□□□ -0.99
VPS13D-210ENST00000489961 A0A0A6YYH2 397 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 A0A0A6YYJ9 748 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 IGHV2-26A0A0B4J1V2 119 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 MEIOCA2RUB1 952 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 A6NJ64 397 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 POM121CA8CG34 1229 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 SERPINE3A8MV23 424 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 NPIPB11E5RHQ5 1161 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 MFNGO00587 321 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 TOR1AO14656 332 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 NAPSAO96009 420 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 ARG1P05089 322 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 GNB3P16520 340 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 ZNF182P17025 639 aaPredicted RBP8.87□□□□□ -0.99
VPS13D-210ENST00000489961 RCC1P18754 421 aaPredicted RBP8.87□□□□□ -0.99
VPS13D-210ENST00000489961 SAA4P35542 130 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 ARFRP1Q13795 201 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 SPCS2Q15005 226 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 LTC4SQ16873 150 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 TMEM30BQ3MIR4 351 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 UBE2NLQ5JXB2 153 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 MZT2AQ6P582 158 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 PIP4P2Q8N4L2 257 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 SAMD12Q8N8I0 201 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 OR11H6Q8NGC7 330 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 RFESDQ8TAC1 157 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 SLC25A38Q96DW6 304 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 S100A16Q96FQ6 103 aaKnown RBP8.87□□□□□ -0.99
VPS13D-210ENST00000489961 KIRREL1Q96J84 757 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 CYYR1Q96J86 154 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 CLEC7AQ9BXN2 247 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 ABCG5Q9H222 651 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 TAF9BQ9HBM6 251 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 DIABLOQ9NR28 239 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 COMMD3Q9UBI1 195 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 FAM96BQ9Y3D0 163 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 CEPT1Q9Y6K0 416 aa8.87□□□□□ -0.99
VPS13D-210ENST00000489961 A0A087X0M5 115 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 TRBV6-6A0A0A6YYG2 114 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 A0A1B0GX30 115 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 FAM172BPA6NC97 362 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 C12orf77C9JDV5 145 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 H3BMQ9 156 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 C15orf65H3BRN8 121 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 SDCBPO00560 298 aaPredicted RBP8.86□□□□□ -0.99
VPS13D-210ENST00000489961 TCF21O43680 179 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 HBZP02008 142 aa8.86□□□□□ -0.99
VPS13D-210ENST00000489961 GSTP1P09211 210 aaKnown RBP8.86□□□□□ -0.99
VPS13D-210ENST00000489961 FBP1P09467 338 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms