RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 SP5Q6BEB4 398 aaPredicted RBP18.03■□□□□ 0.48
SMC4-221ENST00000489573 PEG10Q86TG7 708 aaKnown RBP18.03■□□□□ 0.48
SMC4-221ENST00000489573 TAF9BQ9HBM6 251 aa18.03■□□□□ 0.48
SMC4-221ENST00000489573 USP9XQ93008 2570 aaPredicted RBP18.03■□□□□ 0.48
SMC4-221ENST00000489573 IGKV1-6A0A0C4DH72 117 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 ODAMA1E959 279 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 C7orf66A4D0T2 115 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 OR5H14A6NHG9 310 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 CEACAM18A8MTB9 384 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 TNFRSF13BO14836 293 aaPredicted RBP18.02■□□□□ 0.48
SMC4-221ENST00000489573 BET1O15155 118 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 LY6HO94772 140 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 FPR2P25090 351 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 FCGR2CP31995 323 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 ECI1P42126 302 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 CARTPTQ16568 116 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 TRAT1Q6PIZ9 186 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 MARCH1Q8TCQ1 289 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 TMEM246Q9BRR3 403 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 LIME1Q9H400 295 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 NCOR1P1Q9H4R4 102 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 PCDHB10Q9UN67 800 aa18.02■□□□□ 0.48
SMC4-221ENST00000489573 NDUFA2O43678 99 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 ERP29P30040 261 aaKnown RBP18.01■□□□□ 0.47
SMC4-221ENST00000489573 EDDM3BP56851 147 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 TMED4Q7Z7H5 227 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 OR13A1Q8NGR1 328 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 MRGPRDQ8TDS7 321 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 KIRREL1Q96J84 757 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 SCGB3A2Q96PL1 93 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 TMPRSS13Q9BYE2 586 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 DSCAMO60469 2012 aa18.01■□□□□ 0.47
SMC4-221ENST00000489573 ADAM20O43506 726 aa18■□□□□ 0.47
SMC4-221ENST00000489573 IGHV2-70P01814 119 aa18■□□□□ 0.47
SMC4-221ENST00000489573 IL5P05113 134 aa18■□□□□ 0.47
SMC4-221ENST00000489573 SURF2Q15527 256 aaPredicted RBP18■□□□□ 0.47
SMC4-221ENST00000489573 ZNF554Q86TJ5 538 aa18■□□□□ 0.47
SMC4-221ENST00000489573 DACT3Q96B18 629 aaPredicted RBP18■□□□□ 0.47
SMC4-221ENST00000489573 LURAP1Q96LR2 239 aa18■□□□□ 0.47
SMC4-221ENST00000489573 ALX4Q9H161 411 aaPredicted RBP18■□□□□ 0.47
SMC4-221ENST00000489573 KAAG1Q9UBP8 84 aa18■□□□□ 0.47
SMC4-221ENST00000489573 TRBV6-7A0A0A0MS04 114 aa18■□□□□ 0.47
SMC4-221ENST00000489573 A0A0A6YYJ9 748 aa18■□□□□ 0.47
SMC4-221ENST00000489573 C12orf77C9JDV5 145 aa18■□□□□ 0.47
SMC4-221ENST00000489573 NPIPB11E5RHQ5 1161 aa18■□□□□ 0.47
SMC4-221ENST00000489573 OVOL3O00110 214 aa18■□□□□ 0.47
SMC4-221ENST00000489573 PFDN1O60925 122 aa18■□□□□ 0.47
SMC4-221ENST00000489573 DIRAS3O95661 229 aa18■□□□□ 0.47
SMC4-221ENST00000489573 VSIG10L2P0DP72 767 aa18■□□□□ 0.47
SMC4-221ENST00000489573 NFYAP23511 347 aaPredicted RBP18■□□□□ 0.47
SMC4-221ENST00000489573 METTL11BQ5VVY1 283 aa18■□□□□ 0.47
SMC4-221ENST00000489573 GLDNQ6ZMI3 551 aaPredicted RBP18■□□□□ 0.47
SMC4-221ENST00000489573 PRR18Q8N4B5 295 aa18■□□□□ 0.47
SMC4-221ENST00000489573 IL1F10Q8WWZ1 152 aa18■□□□□ 0.47
SMC4-221ENST00000489573 FXYD6Q9H0Q3 95 aa18■□□□□ 0.47
SMC4-221ENST00000489573 SLC25A10Q9UBX3 287 aaPredicted RBP18■□□□□ 0.47
SMC4-221ENST00000489573 GPR132Q9UNW8 380 aa18■□□□□ 0.47
SMC4-221ENST00000489573 F12P00748 615 aaPredicted RBP17.99■□□□□ 0.47
SMC4-221ENST00000489573 PGAM2P15259 253 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 AADACP22760 399 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 EFNA4P52798 201 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 HERV-K104P61576 105 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 LYPD2Q6UXB3 125 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 MUC20Q8N307 709 aaPredicted RBP17.99■□□□□ 0.47
SMC4-221ENST00000489573 OR10J5Q8NHC4 309 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 IGFBPL1Q8WX77 278 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 MOB3AQ96BX8 217 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 C14orf79Q96F83 325 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 TIMD4Q96H15 378 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 SEC22CQ9BRL7 303 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 DCTN5Q9BTE1 182 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 GHITMQ9H3K2 345 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 CHODLQ9H9P2 273 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 GPN1Q9HCN4 374 aaPredicted RBP17.99■□□□□ 0.47
SMC4-221ENST00000489573 OR6C3Q9NZP0 311 aa17.99■□□□□ 0.47
SMC4-221ENST00000489573 FLNCQ14315 2725 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 NDUFB3O43676 98 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 PPYP01298 95 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 FXYD4P59646 89 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 CBX3Q13185 183 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 CR1LQ2VPA4 569 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 OR1L1Q8NH94 360 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 UBALD1Q8TB05 177 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 CHAC2Q8WUX2 184 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 RAB1CQ92928 201 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 OPN4Q9UHM6 478 aa17.98■□□□□ 0.47
SMC4-221ENST00000489573 TUSC2O75896 110 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 HBZP02008 142 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 NDUFB7P17568 137 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 IL2RGP31785 369 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 TAS2R31P59538 309 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 BAMBIQ13145 260 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 LRRC10Q5BKY1 277 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 AVPI1Q5T686 147 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 SLC25A42Q86VD7 318 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 ZNF565Q8N9K5 539 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 GALMQ96C23 342 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 CCL19Q99731 98 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 OR51J1Q9H342 316 aa17.97■□□□□ 0.47
SMC4-221ENST00000489573 CTSZQ9UBR2 303 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms