RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 HSPB6O14558 160 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 DIRAS1O95057 198 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 SERPINA3P01011 423 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 P0DMU3 169 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 KIR2DS2P43631 304 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 GSSP48637 474 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 ATP1B3P54709 279 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 RPS16P62249 146 aaKnown RBP8.57□□□□□ -1.04
HDAC6-233ENST00000489352 MRGPRG-AS1Q2M3A8 158 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 DEFB114Q30KQ6 69 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 ZNF829Q3KNS6 432 aaPredicted RBP8.57□□□□□ -1.04
HDAC6-233ENST00000489352 AKIRIN2Q53H80 203 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 C19orf54Q5BKX5 351 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 CENPSQ8N2Z9 138 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 MRGPRDQ8TDS7 321 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 MED20Q9H944 212 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 NDUFAF4Q9P032 175 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 ADAM30Q9UKF2 790 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 NUBP2Q9Y5Y2 271 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 V9GYS6 101 aa8.57□□□□□ -1.04
HDAC6-233ENST00000489352 IGKV1-27A0A075B6S5 117 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 NPIPB11E5RHQ5 1161 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 J3QL48 77 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 SDCBPO00560 298 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-233ENST00000489352 GATBO75879 557 aaKnown RBP8.56□□□□□ -1.04
HDAC6-233ENST00000489352 NPPAP01160 153 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 IGLV3-1P01715 115 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 SSTR5P35346 364 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 CRIP2P52943 208 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-233ENST00000489352 CD200R1LQ6Q8B3 271 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 LINC00311Q8N616 119 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 TCEANCQ8N8B7 351 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 FAM162AQ96A26 154 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 RDH12Q96NR8 316 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 OR51V1Q9H2C8 321 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 LINC00574Q9H8X3 128 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 TECRQ9NZ01 308 aaKnown RBP8.56□□□□□ -1.04
HDAC6-233ENST00000489352 NUFIP1Q9UHK0 495 aaKnown RBP8.56□□□□□ -1.04
HDAC6-233ENST00000489352 BAIAP2Q9UQB8 552 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 MYRFQ9Y2G1 1151 aa8.56□□□□□ -1.04
HDAC6-233ENST00000489352 DHRS7CA6NNS2 312 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 SLC33A1O00400 549 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-233ENST00000489352 SELENOFO60613 162 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 RBP2P50120 134 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 CX3CL1P78423 397 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 UBE2V2Q15819 145 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 BCL2L15Q5TBC7 163 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 DEGS2Q6QHC5 323 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 LFNGQ8NES3 379 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 OR14K1Q8NGZ2 314 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 UBALD1Q8TB05 177 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 SNAPC3Q92966 411 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 TMEM109Q9BVC6 243 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 TSSK6Q9BXA6 273 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 GID8Q9NWU2 228 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 NKIRAS1Q9NYS0 192 aa8.55□□□□□ -1.04
HDAC6-233ENST00000489352 IGHV4-4A0A075B6R2 117 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 TTRP02766 147 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 AADACP22760 399 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 RIDAP52758 137 aaKnown RBP8.54□□□□□ -1.04
HDAC6-233ENST00000489352 MTCP1P56278 107 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 NDPQ00604 133 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 SF3A3Q12874 501 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC6-233ENST00000489352 LSAMPQ13449 338 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 PAN3Q58A45 887 aaKnown RBP8.54□□□□□ -1.04
HDAC6-233ENST00000489352 C1orf134Q5TEV5 83 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 PVRIGQ6DKI7 326 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 SLC25A48Q6ZT89 311 aaKnown RBP8.54□□□□□ -1.04
HDAC6-233ENST00000489352 C8orf31Q8N9H6 132 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 OR2T33Q8NG76 320 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 OR51T1Q8NGJ9 327 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 RARRES2Q99969 163 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 FUZQ9BT04 418 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 FAM103A1Q9BTL3 118 aaKnown RBP8.54□□□□□ -1.04
HDAC6-233ENST00000489352 COMMD4Q9H0A8 199 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 IL20Q9NYY1 176 aa8.54□□□□□ -1.04
HDAC6-233ENST00000489352 AGRNO00468 2067 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 KIR2DL5BA0A0G2JN68 375 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 KIR2DL5BA0A0G2JPC4 375 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 LOC110117498-PIK3R3F6TDL0 507 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 MRASO14807 208 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 ZNF254O75437 659 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 OCM2P0CE71 109 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 OCMP0CE72 109 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-233ENST00000489352 GZMHP20718 246 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 ALDH3A2P51648 485 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 TM4SF20Q53R12 229 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 KIR2DL5AQ8N109 375 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 OR52M1Q8NGK5 317 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 KIR2DL5BQ8NHK3 375 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 RITA1Q96K30 269 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 NCOR1P1Q9H4R4 102 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 IL1RAPQ9NPH3 570 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 ZC4H2Q9NQZ6 224 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 IKZF2Q9UKS7 526 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 AP3M1Q9Y2T2 418 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 KLHDC2Q9Y2U9 406 aa8.53□□□□□ -1.04
HDAC6-233ENST00000489352 LRP1BQ9NZR2 4599 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms