RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 C2orf73Q8N5S3 287 aaPredicted RBP2.39□□□□□ -2.03
XRN1-213ENST00000489241 RNF182Q8N6D2 247 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 OR52E4Q8NGH9 312 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 OR5D18Q8NGL1 313 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 SMIM12Q96EX1 92 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 TSSK6Q9BXA6 273 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 POTEKPQ9BYX7 375 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 METTL9Q9H1A3 318 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 TXNIPQ9H3M7 391 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 TP53TG1Q9Y2A0 90 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 KIAA1671Q9BY89 1806 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 CLUHO75153 1309 aa2.39□□□□□ -2.03
XRN1-213ENST00000489241 VWA8A3KMH1 1905 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 DAPL1A0PJW8 107 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 GOLGA6L4A6NEF3 574 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 A8MWP4 228 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 F5H768 121 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 BIRC5O15392 142 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 SOX14O95416 240 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 IGKV1D-33P01593 117 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 IGKV1-33P01594 117 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 IGHG2P01859 326 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 COX5BP10606 129 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 MLNP12872 115 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 CELP19835 753 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 ADORA1P30542 326 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 INPP1P49441 399 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 UBE2IP63279 158 aaKnown RBP2.38□□□□□ -2.03
XRN1-213ENST00000489241 CASP8Q14790 479 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 CLEC12BQ2HXU8 276 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 DNM1P34Q6PK57 102 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 TMEM136Q6ZRR5 245 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 ADM2Q7Z4H4 148 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 ZNF561Q8N587 486 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 OR4C13Q8NGP0 309 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 ZNRF2Q8NHG8 242 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 TAMM41Q96BW9 452 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 PPCDCQ96CD2 204 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 CMTM5Q96DZ9 223 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 MBOAT7Q96N66 472 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 TMEM208Q9BTX3 173 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 NSRP1Q9H0G5 558 aaKnown RBP2.38□□□□□ -2.03
XRN1-213ENST00000489241 UBAP1Q9NZ09 502 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 PLXNB3Q9ULL4 1909 aa2.38□□□□□ -2.03
XRN1-213ENST00000489241 BAZ1BQ9UIG0 1483 aaKnown RBP2.38□□□□□ -2.03
XRN1-213ENST00000489241 COL27A1Q8IZC6 1860 aaPredicted RBP2.37□□□□□ -2.03
XRN1-213ENST00000489241 LOXHD1Q8IVV2 1947 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 TINCRA0A1B0GVN0 87 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 A0A1W2PQ67 120 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 METTL15A6NJ78 407 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 LEUTXA8MZ59 168 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 E2F6O75461 281 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 PSMG1O95456 288 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 PFN1P07737 140 aaKnown RBP2.37□□□□□ -2.03
XRN1-213ENST00000489241 PSKH1P11801 424 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 CD34P28906 385 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 EVI2BP34910 448 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 MMDQ15546 238 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 SLC36A2Q495M3 483 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 CENPWQ5EE01 88 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 LDLRAD2Q5SZI1 272 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 HES3Q5TGS1 186 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 IGFL1Q6UW32 110 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 SPNS3Q6ZMD2 512 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 FAM19A5Q7Z5A7 132 aaPredicted RBP2.37□□□□□ -2.03
XRN1-213ENST00000489241 OR9I1Q8NGQ6 314 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 SMIM19Q96E16 107 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 B9D2Q9BPU9 175 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 ZNF230Q9UIE0 474 aaPredicted RBP2.37□□□□□ -2.03
XRN1-213ENST00000489241 ICOSQ9Y6W8 199 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 ARAP3Q8WWN8 1544 aa2.37□□□□□ -2.03
XRN1-213ENST00000489241 RIMS2Q9UQ26 1411 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 OR5H14A6NHG9 310 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 ZNF729A6NN14 1252 aaPredicted RBP2.36□□□□□ -2.03
XRN1-213ENST00000489241 M0QYV0 167 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 PDYNP01213 254 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 UGT2B7P16662 529 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 ZNF14P17017 642 aaPredicted RBP2.36□□□□□ -2.03
XRN1-213ENST00000489241 GADD45AP24522 165 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 MAGEA2P43356 314 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 MGAT3Q09327 533 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 SMAGPQ0VAQ4 97 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 C1DQ13901 141 aaKnown RBP2.36□□□□□ -2.03
XRN1-213ENST00000489241 HENMT1Q5T8I9 393 aaKnown RBP2.36□□□□□ -2.03
XRN1-213ENST00000489241 TCF23Q7RTU1 214 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 KRTCAP2Q8N6L1 136 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 OR4A5Q8NH83 315 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 CMBLQ96DG6 245 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 PYURFQ96I23 114 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 SLC22A4Q9H015 551 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 GABARAPL1Q9H0R8 117 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 ALX4Q9H161 411 aaPredicted RBP2.36□□□□□ -2.03
XRN1-213ENST00000489241 TRIM45Q9H8W5 580 aaPredicted RBP2.36□□□□□ -2.03
XRN1-213ENST00000489241 MIA3Q5JRA6 1907 aa2.36□□□□□ -2.03
XRN1-213ENST00000489241 BAZ2AQ9UIF9 1905 aaKnown RBP2.36□□□□□ -2.03
XRN1-213ENST00000489241 OR6C70A6NIJ9 312 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 H3BQ85 93 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 AZIN1O14977 448 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 ZW10O43264 779 aa2.35□□□□□ -2.03
XRN1-213ENST00000489241 DEXIO95424 95 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms