RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 M1APQ8TC57 530 aa16.78■□□□□ 0.28
HMG20B-213ENST00000488973 CDX2Q99626 313 aaPredicted RBP16.78■□□□□ 0.28
HMG20B-213ENST00000488973 SF3B5Q9BWJ5 86 aaKnown RBP16.78■□□□□ 0.28
HMG20B-213ENST00000488973 TMEM38BQ9NVV0 291 aa16.78■□□□□ 0.28
HMG20B-213ENST00000488973 URGCP-MRPS24S4R325 110 aa16.78■□□□□ 0.28
HMG20B-213ENST00000488973 A8MXE2 369 aa16.77■□□□□ 0.28
HMG20B-213ENST00000488973 CYC1P08574 325 aa16.77■□□□□ 0.28
HMG20B-213ENST00000488973 VDAC1P21796 283 aa16.77■□□□□ 0.28
HMG20B-213ENST00000488973 IL2RGP31785 369 aa16.77■□□□□ 0.28
HMG20B-213ENST00000488973 RPL23AP62750 156 aaKnown RBP16.77■□□□□ 0.28
HMG20B-213ENST00000488973 SPIN3Q5JUX0 258 aa16.77■□□□□ 0.28
HMG20B-213ENST00000488973 CMTM1Q8IZ96 169 aa16.77■□□□□ 0.28
HMG20B-213ENST00000488973 GAL3ST2Q9H3Q3 398 aa16.77■□□□□ 0.28
HMG20B-213ENST00000488973 TRAV1-1A0A0B4J248 108 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 CYB5BO43169 146 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 OR7C1O76099 320 aaPredicted RBP16.77■□□□□ 0.27
HMG20B-213ENST00000488973 TMEM50AO95807 157 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 ZNF32P17041 273 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 EPHA1P21709 976 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 UCP1P25874 307 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 IL24Q13007 206 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 DAZAP2Q15038 168 aaPredicted RBP16.77■□□□□ 0.27
HMG20B-213ENST00000488973 PLCXD3Q63HM9 321 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 ZNF664Q8N3J9 261 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 ATP5SQ99766 215 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 HS3ST3B1Q9Y662 390 aa16.77■□□□□ 0.27
HMG20B-213ENST00000488973 A0A0J9YW62 118 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 PHOX2AO14813 284 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 TK1P04183 234 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 TAS2R30P59541 319 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 HLA-DRB3P79483 266 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 RUNX1Q01196 453 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 CPEB3Q8NE35 698 aaKnown RBP16.76■□□□□ 0.27
HMG20B-213ENST00000488973 CLDN23Q96B33 292 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 P4HTMQ9NXG6 502 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 ZNF816-ZNF321PA0A0X1KG74 233 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A10PA6NDY2 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A18PA6NE21 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A16PA6NEW6 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A20PA6NIJ5 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A8PA6NJQ4 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A7PA6NKC0 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A22PA8MWA6 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A12PA8MX19 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A5PA8MXJ8 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A23PA8MXZ1 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 TNFSF11O14788 317 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A15PP0C7V4 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A13PP0C7W8 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A14PP0C7W9 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 FAM90A24PP0C7X0 464 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 NKX6-1P78426 367 aaPredicted RBP16.76■□□□□ 0.27
HMG20B-213ENST00000488973 ZNF92Q03936 586 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 JOSD1Q15040 202 aaPredicted RBP16.76■□□□□ 0.27
HMG20B-213ENST00000488973 CLEC2AQ6UVW9 174 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 ZNF818PQ6ZRF7 136 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 TMEM217Q8N7C4 229 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 Q8NFD4 153 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 PLPPR1Q8TBJ4 325 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 CPT1CQ8TCG5 803 aa16.76■□□□□ 0.27
HMG20B-213ENST00000488973 LOC102723971A0A1B0GUV8 181 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 DNPH1O43598 174 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 SOD3P08294 240 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 PIGCQ92535 297 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 EXTL1Q92935 676 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 FAM122AQ96E09 287 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 SRXN1Q9BYN0 137 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 PROK2Q9HC23 129 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 TMEM242Q9NWH2 141 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 OR14J1Q9UGF5 321 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 DVL1O14640 695 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 TGOLN2O43493 480 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 CHST1O43916 411 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 GGCTO75223 188 aaKnown RBP16.75■□□□□ 0.27
HMG20B-213ENST00000488973 TRGC2P03986 189 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 SOX8P57073 446 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 RBX1P62877 108 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 PCOLCEQ15113 449 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 MRPL14Q6P1L8 145 aaKnown RBP16.75■□□□□ 0.27
HMG20B-213ENST00000488973 CALHM1Q8IU99 346 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 GAPTQ8N292 157 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 ZNF611Q8N823 705 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 C22orf15Q8WYQ4 148 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 IL22RA2Q969J5 263 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 Q9N2K0 584 aa16.75■□□□□ 0.27
HMG20B-213ENST00000488973 C9J4A7 227 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 DFFBO76075 338 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 CCL3P10147 92 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 PSG4Q00888 419 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 PNRC1Q12796 327 aaPredicted RBP16.74■□□□□ 0.27
HMG20B-213ENST00000488973 ZNF154Q13106 437 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 TRIM61Q5EBN2 209 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 CALHM2Q9HA72 323 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 RNF115Q9Y4L5 304 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 SMCO3A2RU48 225 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 GJE1A6NN92 205 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 RIPPLY2Q5TAB7 128 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 NEK7Q8TDX7 302 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 PARD6AQ9NPB6 346 aa16.74■□□□□ 0.27
HMG20B-213ENST00000488973 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms