RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 PIN1P1O15428 100 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 GPX5O75715 221 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 LALBAP00709 142 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 PF4P02776 101 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 IGLL1P15814 213 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 TMEM11P17152 192 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 IGFBP3P17936 291 aaPredicted RBP17.95■□□□□ 0.46
PTPN4-211ENST00000488279 DIAPH2-AS1Q14236 149 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 GPR176Q14439 515 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 HNF4GQ14541 408 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 Q499Y3 187 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 KHDC1LQ5JSQ8 128 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 C10orf99Q6UWK7 81 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 MRAPQ8TCY5 172 aa17.95■□□□□ 0.46
PTPN4-211ENST00000488279 LOXL3P58215 753 aa17.94■□□□□ 0.46
PTPN4-211ENST00000488279 DHRSXQ8N5I4 330 aa17.94■□□□□ 0.46
PTPN4-211ENST00000488279 PACRGLQ8N7B6 248 aa17.94■□□□□ 0.46
PTPN4-211ENST00000488279 NEK7Q8TDX7 302 aa17.94■□□□□ 0.46
PTPN4-211ENST00000488279 ARL11Q969Q4 196 aa17.94■□□□□ 0.46
PTPN4-211ENST00000488279 A0A1W2PPE3 182 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 PSMB11A5LHX3 300 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 IGKV1D-33P01593 117 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 IGKV1-33P01594 117 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 RPS11P62280 158 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPN4-211ENST00000488279 ST3GAL4Q11206 333 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 FOXB2Q5VYV0 432 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 STX19Q8N4C7 294 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 ZFP41Q8N8Y5 198 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 OR52M1Q8NGK5 317 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 CCDC107Q8WV48 283 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 GGHQ92820 318 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 SPACA1Q9HBV2 294 aa17.93■□□□□ 0.46
PTPN4-211ENST00000488279 CCRL2O00421 344 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 SDCBPO00560 298 aaPredicted RBP17.92■□□□□ 0.46
PTPN4-211ENST00000488279 FGF16O43320 207 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 ORC5O43913 435 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 MT-ND4P03905 459 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 GAPDHP04406 335 aaKnown RBP17.92■□□□□ 0.46
PTPN4-211ENST00000488279 SLC35A2P78381 396 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 ADARB1P78563 741 aaKnown RBP17.92■□□□□ 0.46
PTPN4-211ENST00000488279 ZNF816Q0VGE8 651 aaPredicted RBP17.92■□□□□ 0.46
PTPN4-211ENST00000488279 MOB3BQ86TA1 216 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 ZNF329Q86UD4 541 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 C5orf56Q8N8D9 126 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 ZNF485Q8NCK3 441 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 PGLYRP3Q96LB9 341 aa17.92■□□□□ 0.46
PTPN4-211ENST00000488279 AURKAIP1Q9NWT8 199 aaPredicted RBP17.92■□□□□ 0.46
PTPN4-211ENST00000488279 DNAH3Q8TD57 4116 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 TRAV8-7A0A075B6U6 113 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 A0A1W2PP11 408 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 A0A1W2PPK0 400 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 MAGEA13PA6NCF6 341 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 C15orf65H3BRN8 121 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 HSD17B6O14756 317 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 ZNF497Q6ZNH5 498 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 JAGN1Q8N5M9 183 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 CHPT1Q8WUD6 406 aa17.91■□□□□ 0.46
PTPN4-211ENST00000488279 MRPS24Q96EL2 167 aaKnown RBP17.91■□□□□ 0.46
PTPN4-211ENST00000488279 TRBV5-7A0A0A0MS05 114 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 IGHV1-3A0A0C4DH29 117 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 EFCAB10A6NFE3 127 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 SERPINE3A8MV23 424 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 MCRIP1C9JLW8 97 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 AIPO00170 330 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 FSTP19883 344 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 TAS2R43P59537 309 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 GLIPR1L1Q6UWM5 242 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 CDH26Q8IXH8 852 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 LINC00311Q8N616 119 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 C8orf31Q8N9H6 132 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 MUL1Q969V5 352 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 RCC1LQ96I51 464 aaKnown RBP17.9■□□□□ 0.46
PTPN4-211ENST00000488279 OR14A2Q96R54 314 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 GFOD1Q9NXC2 390 aa17.9■□□□□ 0.46
PTPN4-211ENST00000488279 MRPS28Q9Y2Q9 187 aaKnown RBP17.9■□□□□ 0.46
PTPN4-211ENST00000488279 DUS4LO95620 317 aaKnown RBP17.89■□□□□ 0.45
PTPN4-211ENST00000488279 IL3RAP26951 378 aa17.89■□□□□ 0.45
PTPN4-211ENST00000488279 REG1BP48304 166 aa17.89■□□□□ 0.45
PTPN4-211ENST00000488279 EBI3Q14213 229 aa17.89■□□□□ 0.45
PTPN4-211ENST00000488279 UBALD1Q8TB05 177 aa17.89■□□□□ 0.45
PTPN4-211ENST00000488279 NOL4LQ96MY1 436 aaPredicted RBP17.89■□□□□ 0.45
PTPN4-211ENST00000488279 RAB9BQ9NP90 201 aa17.89■□□□□ 0.45
PTPN4-211ENST00000488279 CNOT2Q9NZN8 540 aaKnown RBP17.89■□□□□ 0.45
PTPN4-211ENST00000488279 TRAPPC2LQ9UL33 140 aa17.89■□□□□ 0.45
PTPN4-211ENST00000488279 PNMA8CA0A1B0GUJ8 204 aa17.88■□□□□ 0.45
PTPN4-211ENST00000488279 NCBP2LA6PVI3 153 aaKnown RBP17.88■□□□□ 0.45
PTPN4-211ENST00000488279 MAS1P04201 325 aa17.88■□□□□ 0.45
PTPN4-211ENST00000488279 SLC35B1P78383 322 aa17.88■□□□□ 0.45
PTPN4-211ENST00000488279 SYT6Q5T7P8 510 aaPredicted RBP17.88■□□□□ 0.45
PTPN4-211ENST00000488279 AWAT2Q6E213 333 aa17.88■□□□□ 0.45
PTPN4-211ENST00000488279 SLC35E3Q7Z769 313 aa17.88■□□□□ 0.45
PTPN4-211ENST00000488279 FOXRED2Q8IWF2 684 aa17.88■□□□□ 0.45
PTPN4-211ENST00000488279 EAF1Q96JC9 268 aaPredicted RBP17.88■□□□□ 0.45
PTPN4-211ENST00000488279 RCC2Q9P258 522 aaKnown RBP17.88■□□□□ 0.45
PTPN4-211ENST00000488279 IGHV3-43A0A0B4J1X8 118 aa17.87■□□□□ 0.45
PTPN4-211ENST00000488279 IGHV3-72A0A0B4J1Y9 119 aa17.87■□□□□ 0.45
PTPN4-211ENST00000488279 SPINT2O43291 252 aa17.87■□□□□ 0.45
PTPN4-211ENST00000488279 IGHG2P01859 326 aa17.87■□□□□ 0.45
PTPN4-211ENST00000488279 IGHV3-43DP0DP04 118 aa17.87■□□□□ 0.45
PTPN4-211ENST00000488279 CELP19835 753 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms