RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 INIPQ9NRY2 104 aa2.57□□□□□ -2
GPNMB-212ENST00000487890 EXD2Q9NVH0 621 aa2.57□□□□□ -2
GPNMB-212ENST00000487890 ADA2Q9NZK5 511 aa2.57□□□□□ -2
GPNMB-212ENST00000487890 MYEF2Q9P2K5 600 aaKnown RBP2.57□□□□□ -2
GPNMB-212ENST00000487890 MARCOQ9UEW3 520 aaPredicted RBP2.57□□□□□ -2
GPNMB-212ENST00000487890 ZNF580Q9UK33 172 aa2.57□□□□□ -2
GPNMB-212ENST00000487890 ERGIC3Q9Y282 383 aa2.57□□□□□ -2
GPNMB-212ENST00000487890 KCNIP3Q9Y2W7 256 aa2.57□□□□□ -2
GPNMB-212ENST00000487890 KPTNQ9Y664 436 aa2.57□□□□□ -2
GPNMB-212ENST00000487890 URGCP-MRPS24S4R325 110 aa2.57□□□□□ -2
GPNMB-212ENST00000487890 FBN1P35555 2871 aaKnown RBP2.57□□□□□ -2
GPNMB-212ENST00000487890 ARHGAP32A7KAX9 2087 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 IGKV1D-8A0A087WSZ0 117 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 PRSS37A4D1T9 235 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 OR5B21A6NL26 309 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 CLDN24A6NM45 220 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 SERPINE3A8MV23 424 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 TMEM238C9JI98 176 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 LRRN3E7EW58 273 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 H7C423 109 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 SIVA1O15304 175 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 BIRC5O15392 142 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 DENRO43583 198 aaKnown RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 NDUFA2O43678 99 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 EIF4E2O60573 245 aaKnown RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 ZNF253O75346 499 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 OR2J3O76001 311 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 KRT75O95678 551 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 LY6G6DO95868 133 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 CGAP01215 116 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 ERCC1P07992 297 aaPredicted RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 IFI6P09912 130 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 PSKH1P11801 424 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 GGT1P19440 569 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 RAB4AP20338 218 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 PSMB1P20618 241 aaKnown RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 HSD11B1P28845 292 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 CALCRP30988 508 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 OTX1P32242 354 aaPredicted RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 IDH2P48735 452 aaKnown RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 RPL14P50914 215 aaKnown RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 ZNF83P51522 516 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 BIDP55957 195 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 SPCS3P61009 180 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 CXCR4P61073 352 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 BSPH1Q075Z2 132 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 SKP2Q13309 424 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 OR5I1Q13606 314 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 GUSBP1Q15486 140 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 NDUFA5Q16718 116 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 YIF1BQ5BJH7 314 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 C9orf135Q5VTT2 229 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 GPR107Q5VW38 600 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 TFAP2EQ6VUC0 442 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 RNF165Q6ZSG1 346 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 S100A7AQ86SG5 101 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 HIPK1Q86Z02 1210 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 CADM2Q8N3J6 435 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 MAPK1IP1LQ8NDC0 245 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 TMEM104Q8NE00 496 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 C19orf18Q8NEA5 215 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 OR13C9Q8NGT0 318 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 PIGXQ8TBF5 258 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 LZICQ8WZA0 190 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 APH1AQ96BI3 265 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 ROPN1LQ96C74 230 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 LINC00479Q96M42 142 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 OR52E6Q96RD3 313 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 MCRIP2Q9BUT9 160 aaKnown RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 C1QTNF6Q9BXI9 259 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 OR11A1Q9GZK7 315 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 NMUR2Q9GZQ4 415 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 CTPS2Q9NRF8 586 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 ACER3Q9NUN7 267 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 MRM2Q9UI43 246 aaKnown RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 COPS3Q9UNS2 423 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 SLC35A3Q9Y2D2 325 aa2.56□□□□□ -2
GPNMB-212ENST00000487890 TBL2Q9Y4P3 447 aaKnown RBP2.56□□□□□ -2
GPNMB-212ENST00000487890 TMED7-TICAM2A0A0A6YYA0 188 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 A0A0G2JRQ6 117 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 A0A1B0GU03 582 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 CCDC182A6NF36 153 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 C5orf58C9J3I9 102 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 M0R1B8 84 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 RFXANKO14593 260 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 MRPL33O75394 65 aaKnown RBP2.55□□□□□ -2
GPNMB-212ENST00000487890 GCM2O75603 506 aaPredicted RBP2.55□□□□□ -2
GPNMB-212ENST00000487890 DYSFO75923 2080 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 KBTBD11O94819 623 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 SNAPINO95295 136 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 TSPAN13O95857 204 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 DHFRP00374 187 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 BCHEP06276 602 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 GKN3PP0CG01 181 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 RBMY1CP0DJD4 496 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 CXCR1P25024 350 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 HLA-DMAP28067 261 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 GTF2E2P29084 291 aaKnown RBP2.55□□□□□ -2
GPNMB-212ENST00000487890 VHLP40337 213 aa2.55□□□□□ -2
GPNMB-212ENST00000487890 FABP6P51161 128 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms