RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 SLX4IPQ5VYV7 408 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 Q6ZRM9 215 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 TMEM61Q8N0U2 210 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 POM121L12Q8N7R1 296 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 BBS1Q8NFJ9 593 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 OR9Q2Q8NGE9 314 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 OTOSQ8NHW6 89 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 C11orf45Q8TAV5 145 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 FBLIM1Q8WUP2 373 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 STON2Q8WXE9 905 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 RFT1Q96AA3 541 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 RDH12Q96NR8 316 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 BTBD10Q9BSF8 475 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 FBXL15Q9H469 300 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 ANKRD19PQ9H560 264 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 LINC00574Q9H8X3 128 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 SEBOXQ9HB31 216 aaPredicted RBP4.27□□□□□ -1.73
COL4A3-206ENST00000487633 RANGRFQ9HD47 186 aaPredicted RBP4.27□□□□□ -1.73
COL4A3-206ENST00000487633 HMG20AQ9NP66 347 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 ZC4H2Q9NQZ6 224 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 DCAF13Q9NV06 445 aaKnown RBP4.27□□□□□ -1.73
COL4A3-206ENST00000487633 ARMC1Q9NVT9 282 aa4.27□□□□□ -1.73
COL4A3-206ENST00000487633 MEIKINA0A087WXM9 373 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 TMEM269A0A1B0GVZ9 245 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 C15orf65H3BRN8 121 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 GSC2O15499 205 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 IDH3BO43837 385 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 SCAF4O95104 1147 aaKnown RBP4.26□□□□□ -1.73
COL4A3-206ENST00000487633 SOX14O95416 240 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 HLA-AP01891 365 aaKnown RBP4.26□□□□□ -1.73
COL4A3-206ENST00000487633 APOC1P02654 83 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 IFNA8P32881 189 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 XGP55808 180 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 PPP1R8Q12972 351 aaKnown RBP4.26□□□□□ -1.73
COL4A3-206ENST00000487633 BNIP1Q12981 228 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 CYLC2Q14093 348 aaPredicted RBP4.26□□□□□ -1.73
COL4A3-206ENST00000487633 C5orf64Q2M2E5 130 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 TM4SF20Q53R12 229 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 RSBN1Q5VWQ0 802 aaPredicted RBP4.26□□□□□ -1.73
COL4A3-206ENST00000487633 LIN54Q6MZP7 749 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 CGB2Q6NT52 195 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 UNQ5815/PRO19632Q6UWF5 114 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 Q6ZWC4 215 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 FKBP9P1Q75LS8 142 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 ZNF767PQ75MW2 155 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.26□□□□□ -1.73
COL4A3-206ENST00000487633 ODF3L1Q8IXM7 274 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 IQCF1Q8N6M8 205 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 ZNF439Q8NDP4 499 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 OR5T1Q8NG75 326 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 OR2T12Q8NG77 320 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 CLCC1Q96S66 551 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 CHRDL1Q9BU40 450 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 TINAGL1Q9GZM7 467 aaPredicted RBP4.26□□□□□ -1.73
COL4A3-206ENST00000487633 OR51V1Q9H2C8 321 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 EXOSC4Q9NPD3 245 aaKnown RBP4.26□□□□□ -1.73
COL4A3-206ENST00000487633 SAR1AQ9NR31 198 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 FBXL7Q9UJT9 491 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 TP53TG1Q9Y2A0 90 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 DMRT1Q9Y5R6 373 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 V9GYQ6 96 aa4.26□□□□□ -1.73
COL4A3-206ENST00000487633 TRAV24A0A0B4J272 114 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 CXCR6O00574 342 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 ARPC1BO15143 372 aaKnown RBP4.25□□□□□ -1.73
COL4A3-206ENST00000487633 NBR2O15453 112 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 NDUFA3O95167 84 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 IFNA14P01570 189 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 IFNA4P05014 189 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 CSN2P05814 226 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 ZNF44P15621 663 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 ALOX5APP20292 161 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 ZP3P21754 424 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 TSPAN31Q12999 210 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 MRGPRG-AS1Q2M3A8 158 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 TMEM177Q53S58 311 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 ACTBL2Q562R1 376 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 CT45A1Q5HYN5 189 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 ZNF660Q6AZW8 331 aaPredicted RBP4.25□□□□□ -1.73
COL4A3-206ENST00000487633 ERICH5Q6P6B1 374 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 CD200R1LQ6Q8B3 271 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 Q6ZSR3 168 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 SLC25A48Q6ZT89 311 aaKnown RBP4.25□□□□□ -1.73
COL4A3-206ENST00000487633 Q6ZTC4 211 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 SPATA12Q7Z6I5 190 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 PPP1R27Q86WC6 154 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 LAX1Q8IWV1 398 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 LINC00311Q8N616 119 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 NPBQ8NG41 125 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 OR8J3Q8NGG0 315 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 OR51T1Q8NGJ9 327 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 OR5D18Q8NGL1 313 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 CT45A3Q8NHU0 189 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 CCDC140Q96MF4 163 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 SH3GL1Q99961 368 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 TSSK6Q9BXA6 273 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 MRPL20Q9BYC9 149 aaKnown RBP4.25□□□□□ -1.73
COL4A3-206ENST00000487633 COMMD4Q9H0A8 199 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 GID8Q9NWU2 228 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 IL20Q9NYY1 176 aa4.25□□□□□ -1.73
COL4A3-206ENST00000487633 MLXQ9UH92 298 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms