RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 RPL18Q07020 188 aaKnown RBP2.98□□□□□ -1.93
PTCD3-216ENST00000487043 PMS2P3Q13401 168 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 GNMTQ14749 295 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 OR7A5Q15622 319 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 BCL2A1Q16548 175 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 DGUOKQ16854 277 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 PGGHGQ32M88 737 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 KLF17Q5JT82 389 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-216ENST00000487043 CLEC2AQ6UVW9 174 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 PAMR1Q6UXH9 720 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 UNQ9370/PRO34162Q6UXP9 181 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 Q6ZS92 163 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 FAM122BQ7Z309 247 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 HSD17B13Q7Z5P4 300 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-216ENST00000487043 LUZP2Q86TE4 346 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 TMEM251Q8N6I4 163 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 TMEM252Q8N6L7 170 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 ATP6V1C2Q8NEY4 427 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 OR52E2Q8NGJ4 325 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 OR5M1Q8NGP8 315 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 OR5J2Q8NH18 312 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 FANK1Q8TC84 345 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 MYDGFQ969H8 173 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 ERMAPQ96PL5 475 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-216ENST00000487043 PAXXQ9BUH6 204 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 TTTY12Q9BZ98 90 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 NDEL1Q9GZM8 345 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 TXNIPQ9H3M7 391 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 PLGRKTQ9HBL7 147 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 CCNB1IP1Q9NPC3 277 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 INIPQ9NRY2 104 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 FKBP14Q9NWM8 211 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 CLN6Q9NWW5 311 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 Q9UF83 564 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 IER3IP1Q9Y5U9 82 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 SPTBN2O15020 2390 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 CNTRLQ7Z7A1 2325 aa2.98□□□□□ -1.93
PTCD3-216ENST00000487043 MPDZO75970 2070 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 RAI1Q7Z5J4 1906 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 URB1O60287 2271 aaKnown RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 A0A1W2PRG6 482 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 IRGMA1A4Y4 181 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 EFCAB10A6NFE3 127 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 RIIAD1A6NNX1 92 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 FAM166BA8MTA8 275 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 M0R129 80 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 M0R3G1 203 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 PPP1R2P9O14990 202 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 IFNGP01579 166 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 IGHMP01871 453 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 CDK1P06493 297 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 FREM3P0C091 2139 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 PIPP12273 146 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 HIST1H1CP16403 213 aaKnown RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF708P17019 499 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF24P17028 368 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF3P17036 446 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 SLC2A5P22732 501 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 GTF2E2P29084 291 aaKnown RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 RFC3P40938 356 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 MEOX2P50222 304 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 LHX2P50458 406 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 CLDN18P56856 261 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 CARD18P57730 90 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 SELENOTP62341 195 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 RAP1AP62834 184 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 TLE4Q04727 773 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 EMX1Q04741 257 aaPredicted RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ST3GAL4Q11206 333 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 APOFQ13790 326 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 IL18Q14116 193 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 PON3Q15166 354 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 MRPL23Q16540 153 aaKnown RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 NDUFA5Q16718 116 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 MESTQ5EB52 335 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF773Q6PK81 442 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 SLC35D2Q76EJ3 337 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 FAM220AQ7Z4H9 259 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 PPP1R27Q86WC6 154 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 RDH10Q8IZV5 341 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 STX19Q8N4C7 294 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 CD177Q8N6Q3 437 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF525Q8N782 197 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ARIH2OSQ8N7S6 290 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 OR52I1Q8NGK6 324 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 OR4K13Q8NH42 304 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 NEIL3Q8TAT5 605 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 PLPPR1Q8TBJ4 325 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ZHX1-C8orf76Q96EF9 292 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 Q96M85 177 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 TSPAN32Q96QS1 320 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 NMNAT3Q96T66 252 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 TEAD3Q99594 435 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 COPS4Q9BT78 406 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 C20orf24Q9BUV8 137 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 TMEM59Q9BXS4 323 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 MRPS26Q9BYN8 205 aaKnown RBP2.97□□□□□ -1.93
PTCD3-216ENST00000487043 DEFB127Q9H1M4 99 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 ZDHHC11Q9H8X9 412 aa2.97□□□□□ -1.93
PTCD3-216ENST00000487043 CRLF2Q9HC73 371 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms