RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 DHRS7BQ6IAN0 325 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 Q6P435 159 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 VASH2Q86V25 355 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 OR5D13Q8NGL4 314 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 OR8U1Q8NH10 309 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 IL22RA2Q969J5 263 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 GPHA2Q96T91 129 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 LRP5LA4QPB2 252 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 PGLYRP1O75594 196 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 F12P00748 615 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 CELA3BP08861 270 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 ZNF44P15621 663 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 PPP1CBP62140 327 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 FAM76BQ5HYJ3 339 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 H1FOOQ8IZA3 346 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 OR10J5Q8NHC4 309 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 KIRREL1Q96J84 757 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 LUZP4Q9P127 313 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 CLCF1Q9UBD9 225 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 OR2W1Q9Y3N9 320 aa15.29■□□□□ 0.04
PDLIM7-207ENST00000486828 FAM157AC9JC47 383 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 ATP6V1G2-DDX39BF2Z307 99 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 C3orf80F5H4A9 247 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 H2AFB1P0C5Y9 115 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 VDAC1P21796 283 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 IGHV1-2P23083 117 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 CD80P33681 288 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 NPBWR1P48145 328 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 RAB5CP51148 216 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 UBE2NP61088 152 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 POLR2GP62487 172 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 TGFBR3Q03167 851 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 IGFBP7Q16270 282 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 TMEM88Q6PEY1 159 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 WDR86Q86TI4 376 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 COMMD1Q8N668 190 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 PARP12Q9H0J9 701 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 CDH20Q9HBT6 801 aa15.28■□□□□ 0.04
PDLIM7-207ENST00000486828 IGSF23A1L1A6 192 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 FAM24AA6NFZ4 105 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 CDRT15L2A8MXV6 281 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 TSPAN15O95858 294 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 IGHG3P01860 377 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 S100GP29377 79 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 MDH2P40926 338 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 Q8IYB0 196 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 OR2J1Q9GZK6 312 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 SH3BGRL3Q9H299 93 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 TREM2Q9NZC2 230 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 CACFD1Q9UGQ2 172 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 POLDIP2Q9Y2S7 368 aa15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 STRAPQ9Y3F4 350 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-207ENST00000486828 C9JQL5 133 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 NPIPB11E5RHQ5 1161 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 F2RP25116 425 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 CAMLGP49069 296 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 IDH3GP51553 393 aaPredicted RBP15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 UCP2P55851 309 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 ERVK11-1P61568 191 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 ID3Q02535 119 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 MIDNQ504T8 468 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 CXorf66Q5JRM2 361 aaPredicted RBP15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 CBLN2Q8IUK8 224 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 SCCPDHQ8NBX0 429 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 PLEKHF2Q9H8W4 249 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 LYRM2Q9NU23 88 aaPredicted RBP15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 NDRG3Q9UGV2 375 aa15.27■□□□□ 0.03
PDLIM7-207ENST00000486828 A0A1W2PR80 420 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 TNFSF12O43508 249 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 SSSCA1O60232 199 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 PITX3O75364 302 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 SNCAP37840 140 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 MOB1BQ7L9L4 216 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 HSD17B11Q8NBQ5 300 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 PLPPR1Q8TBJ4 325 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 SPOCK3Q9BQ16 436 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 SLC25A31Q9H0C2 315 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 C19orf12Q9NSK7 152 aa15.26■□□□□ 0.03
PDLIM7-207ENST00000486828 NKX2-8O15522 239 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 WNT2P09544 360 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 MMP9P14780 707 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 RAC2P15153 192 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 ERVS71-1P61550 626 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 VAMP2P63027 116 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 ZNF616Q08AN1 781 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 ZNF266Q14584 549 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 SHEQ5VZ18 495 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 FAM214BQ7L5A3 538 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 GCNT2Q8N0V5 402 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 TMEM252Q8N6L7 170 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 MAGT1Q9H0U3 335 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 ERRFI1Q9UJM3 462 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 PIGBOS1A0A0B4J2F0 54 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 IQCF6A8MYZ5 107 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 SLC33A1O00400 549 aaPredicted RBP15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 LYZL6O75951 148 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 OR2H2O95918 312 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 ASCL1P50553 236 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 CCL11P51671 97 aa15.25■□□□□ 0.03
PDLIM7-207ENST00000486828 INO80CQ6PI98 192 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms