RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 UBALD1Q8TB05 177 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 FAM3DQ96BQ1 224 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 KIRREL1Q96J84 757 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 NEDD4LQ96PU5 975 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 SSX3Q99909 188 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 CHCHD6Q9BRQ6 235 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 VCX3AQ9NNX9 186 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 IDI2-AS1Q9NZ38 188 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 SSR3Q9UNL2 185 aa11.97□□□□□ -0.49
USP4-212ENST00000486549 TBL2Q9Y4P3 447 aaKnown RBP11.97□□□□□ -0.49
USP4-212ENST00000486549 A0A087WXM4 84 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 LOC100506127A0A0U1RQW1 187 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 IGHV3-7P01780 117 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 MT-ND4P03905 459 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 CRYBA1P05813 215 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 CGB3P0DN86 165 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 CGB7P0DN87 165 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 HKR1P10072 659 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 CD36P16671 472 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 FAM189A2Q15884 450 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 SSX2Q16385 188 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 LY6EQ16553 131 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 LDLRAD2Q5SZI1 272 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 UTF1Q5T230 341 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 OR2W3Q7Z3T1 314 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 SGMS2Q8NHU3 365 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 LEAP2Q969E1 77 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 TM2D1Q9BX74 207 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 STEAP1Q9UHE8 339 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 VPREB3Q9UKI3 123 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 TRAPPC2LQ9UL33 140 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 HILPDAQ9Y5L2 63 aa11.96□□□□□ -0.49
USP4-212ENST00000486549 A0A0A6YYD4 124 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 H3BUI4 141 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 TOR1AO14656 332 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 GPR137BO60478 399 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 GADD45AP24522 165 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 CHATP28329 748 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 BLVRBP30043 206 aaPredicted RBP11.95□□□□□ -0.5
USP4-212ENST00000486549 FGF9P31371 208 aaPredicted RBP11.95□□□□□ -0.5
USP4-212ENST00000486549 GNG10P50151 68 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 C2orf76Q3KRA6 126 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 C6orf201Q7Z4U5 140 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 RTN4RL2Q86UN3 420 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 OR4P4Q8NGL7 312 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 OR5R1Q8NH85 324 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 ZNF596Q8TC21 504 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 ARL11Q969Q4 196 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 SULT4A1Q9BR01 284 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 URM1Q9BTM9 101 aaKnown RBP11.95□□□□□ -0.5
USP4-212ENST00000486549 LPAR5Q9H1C0 372 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 MEGF9Q9H1U4 602 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 TENM1Q9UKZ4 2725 aa11.95□□□□□ -0.5
USP4-212ENST00000486549 A0A0B4J203 849 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 TMEM272A0A1B0GTI8 110 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 IFITM5A6NNB3 132 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 GLAP06280 429 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 JUNBP17275 347 aaPredicted RBP11.94□□□□□ -0.5
USP4-212ENST00000486549 GZMHP20718 246 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 HTR1DP28221 377 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 VEGFCP49767 419 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 PLA2G7Q13093 441 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 C6orf183Q5T699 404 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 MINOS1Q5TGZ0 78 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 NR2C2APQ86WQ0 139 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 PRR18Q8N4B5 295 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 MRPL30Q8TCC3 161 aaKnown RBP11.94□□□□□ -0.5
USP4-212ENST00000486549 MALSU1Q96EH3 234 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 FAAP24Q9BTP7 215 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 RNF167Q9H6Y7 350 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 ZNF696Q9H7X3 374 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 ABCB10Q9NRK6 738 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 MINOS1-NBL1R4GNA1 71 aa11.94□□□□□ -0.5
USP4-212ENST00000486549 A0A087X0M5 115 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 IGHV3-43A0A0B4J1X8 118 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 A0A1B0GX30 115 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 C12orf77C9JDV5 145 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 C15orf65H3BRN8 121 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 SDCBPO00560 298 aaPredicted RBP11.93□□□□□ -0.5
USP4-212ENST00000486549 SOCS1O15524 211 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 ORC5O43913 435 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 CA11O75493 328 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 IGHV3-43DP0DP04 118 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 SLC2A2P11168 524 aaPredicted RBP11.93□□□□□ -0.5
USP4-212ENST00000486549 RCC1P18754 421 aaPredicted RBP11.93□□□□□ -0.5
USP4-212ENST00000486549 CD34P28906 385 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 RANBP1P43487 201 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 RAB13P51153 203 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 PRRX1P54821 245 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 MXD1Q05195 221 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 AWAT1Q58HT5 328 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 DHRS7BQ6IAN0 325 aaPredicted RBP11.93□□□□□ -0.5
USP4-212ENST00000486549 GDPGP1Q6ZNW5 385 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 OR9G1Q8NH87 305 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 KCTD7Q96MP8 289 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 LIN7BQ9HAP6 207 aa11.93□□□□□ -0.5
USP4-212ENST00000486549 CHMP1AQ9HD42 196 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms