RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 PPP3R1P63098 170 aa17.78■□□□□ 0.44
SREBF1-214ENST00000486311 SLC35A2P78381 396 aa17.78■□□□□ 0.44
SREBF1-214ENST00000486311 TMPRSS11AQ6ZMR5 421 aa17.78■□□□□ 0.44
SREBF1-214ENST00000486311 RCC1LQ96I51 464 aaKnown RBP17.78■□□□□ 0.44
SREBF1-214ENST00000486311 SCN3BQ9NY72 215 aa17.78■□□□□ 0.44
SREBF1-214ENST00000486311 BLOC1S6Q9UL45 172 aa17.78■□□□□ 0.44
SREBF1-214ENST00000486311 ING4Q9UNL4 249 aa17.78■□□□□ 0.44
SREBF1-214ENST00000486311 SIRT4Q9Y6E7 314 aaPredicted RBP17.78■□□□□ 0.44
SREBF1-214ENST00000486311 TRAV39A0A0B4J263 110 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 PSMB11A5LHX3 300 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 OGG1O15527 345 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 OR7C1O76099 320 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-214ENST00000486311 TMEM11P17152 192 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 ZNF93P35789 620 aaPredicted RBP17.77■□□□□ 0.44
SREBF1-214ENST00000486311 GNG10P50151 68 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 RBM11P57052 281 aaKnown RBP17.77■□□□□ 0.44
SREBF1-214ENST00000486311 KHDC1LQ5JSQ8 128 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 C6orf141Q5SZD1 244 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 DDI2Q5TDH0 399 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 OR2G6Q5TZ20 316 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 C5orf56Q8N8D9 126 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 OR52N1Q8NH53 320 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 TPRKBQ9Y3C4 175 aa17.77■□□□□ 0.44
SREBF1-214ENST00000486311 FGF16O43320 207 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 GZMHP20718 246 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 BDKRB2P30411 391 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 HES1Q14469 280 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 RBM48Q5RL73 367 aaKnown RBP17.76■□□□□ 0.43
SREBF1-214ENST00000486311 LINC00596Q86U02 117 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 OR10X1Q8NGY0 326 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 SMIM19Q96E16 107 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 YTHDF1Q9BYJ9 559 aaKnown RBP17.76■□□□□ 0.43
SREBF1-214ENST00000486311 PLCXD1Q9NUJ7 323 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 PAK1IP1Q9NWT1 392 aaPredicted RBP17.76■□□□□ 0.43
SREBF1-214ENST00000486311 BABAM2Q9NXR7 383 aa17.76■□□□□ 0.43
SREBF1-214ENST00000486311 TMEM30CPA0ZSE6 113 aa17.75■□□□□ 0.43
SREBF1-214ENST00000486311 EFCAB10A6NFE3 127 aa17.75■□□□□ 0.43
SREBF1-214ENST00000486311 GEMIN2O14893 280 aaKnown RBP17.75■□□□□ 0.43
SREBF1-214ENST00000486311 DUS4LO95620 317 aaKnown RBP17.75■□□□□ 0.43
SREBF1-214ENST00000486311 CSTBP04080 98 aaKnown RBP17.75■□□□□ 0.43
SREBF1-214ENST00000486311 MPV17LQ2QL34 196 aa17.75■□□□□ 0.43
SREBF1-214ENST00000486311 BPIFB6Q8NFQ5 453 aa17.75■□□□□ 0.43
SREBF1-214ENST00000486311 S100A13Q99584 98 aa17.75■□□□□ 0.43
SREBF1-214ENST00000486311 DIMT1Q9UNQ2 313 aaKnown RBP17.75■□□□□ 0.43
SREBF1-214ENST00000486311 A0A1W2PPE3 182 aa17.74■□□□□ 0.43
SREBF1-214ENST00000486311 ZNF780AO75290 641 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-214ENST00000486311 IGKV1D-33P01593 117 aa17.74■□□□□ 0.43
SREBF1-214ENST00000486311 IGKV1-33P01594 117 aa17.74■□□□□ 0.43
SREBF1-214ENST00000486311 IGFBP3P17936 291 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-214ENST00000486311 ZNF816Q0VGE8 651 aaPredicted RBP17.74■□□□□ 0.43
SREBF1-214ENST00000486311 HNF4GQ14541 408 aa17.74■□□□□ 0.43
SREBF1-214ENST00000486311 ZNF329Q86UD4 541 aa17.74■□□□□ 0.43
SREBF1-214ENST00000486311 LINC00482Q8N8I6 264 aa17.74■□□□□ 0.43
SREBF1-214ENST00000486311 OR52M1Q8NGK5 317 aa17.74■□□□□ 0.43
SREBF1-214ENST00000486311 CHPT1Q8WUD6 406 aa17.74■□□□□ 0.43
SREBF1-214ENST00000486311 CNOT2Q9NZN8 540 aaKnown RBP17.74■□□□□ 0.43
SREBF1-214ENST00000486311 EXOSC1Q9Y3B2 195 aaKnown RBP17.74■□□□□ 0.43
SREBF1-214ENST00000486311 TRBV5-5A0A0J9YX44 114 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 C15orf65H3BRN8 121 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 HSD17B6O14756 317 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 GPX5O75715 221 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 MPIG6BO95866 241 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 LALBAP00709 142 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 MYL12AP19105 171 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 SERPINA2P20848 420 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 EBI3Q14213 229 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 LINC00311Q8N616 119 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 OR13C5Q8NGS8 318 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 GHSRQ92847 366 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 ARL11Q969Q4 196 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 ORAI1Q96D31 301 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 NOL4LQ96MY1 436 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-214ENST00000486311 CLEC2DQ9UHP7 191 aa17.73■□□□□ 0.43
SREBF1-214ENST00000486311 IGHV1-3A0A0C4DH29 117 aa17.72■□□□□ 0.43
SREBF1-214ENST00000486311 K7EIL1 84 aa17.72■□□□□ 0.43
SREBF1-214ENST00000486311 CCRL2O00421 344 aa17.72■□□□□ 0.43
SREBF1-214ENST00000486311 IGHG2P01859 326 aa17.72■□□□□ 0.43
SREBF1-214ENST00000486311 GAPDHP04406 335 aaKnown RBP17.72■□□□□ 0.43
SREBF1-214ENST00000486311 GTF2F2P13984 249 aa17.72■□□□□ 0.43
SREBF1-214ENST00000486311 RPL23AP62750 156 aaKnown RBP17.72■□□□□ 0.43
SREBF1-214ENST00000486311 ATAD3CQ5T2N8 411 aa17.72■□□□□ 0.43
SREBF1-214ENST00000486311 DMKNQ6E0U4 476 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-214ENST00000486311 ETV3LQ6ZN32 361 aa17.72■□□□□ 0.43
SREBF1-214ENST00000486311 C8orf31Q8N9H6 132 aa17.72■□□□□ 0.43
SREBF1-214ENST00000486311 A0A1W2PP11 408 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 SERPINE3A8MV23 424 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 ORC5O43913 435 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 MT-ND4P03905 459 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 RPS11P62280 158 aaKnown RBP eCLIP17.71■□□□□ 0.43
SREBF1-214ENST00000486311 Q499Y3 187 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 SLC22A6Q4U2R8 563 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 YIF1BQ5BJH7 314 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 LAIR2Q6ISS4 152 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 ZNF497Q6ZNH5 498 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 SLC35E3Q7Z769 313 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 MOB3BQ86TA1 216 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 MRPL41Q8IXM3 137 aaKnown RBP17.71■□□□□ 0.43
SREBF1-214ENST00000486311 IZUMO1Q8IYV9 350 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 OR51D1Q8NGF3 324 aa17.71■□□□□ 0.43
SREBF1-214ENST00000486311 ZFP57Q9NU63 452 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms