RNA–Protein interactions for RNA: ENST00000485934.1

HDHD3-203, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

TSL 2

Gene HDHD3, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-203ENST00000485934 CD34P28906 385 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 CEACAM3P40198 252 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 VEGFCP49767 419 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 ARHGDIBP52566 201 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 MXD1Q05195 221 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 KLRD1Q13241 179 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 AANATQ16613 207 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 ZNF626Q68DY1 528 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 GPR141Q7Z602 305 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 OR52M1Q8NGK5 317 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 OR13A1Q8NGR1 328 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 ARL11Q969Q4 196 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 FAAP24Q9BTP7 215 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 IDI2-AS1Q9NZ38 188 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 ETV7Q9Y603 341 aa12.55□□□□□ -0.4
HDHD3-203ENST00000485934 IGHV2-26A0A0B4J1V2 119 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 A0A1W2PRD5 423 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 A0A1W2PRF3 423 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 A0A1W2PRM7 423 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 SMIM18P0DKX4 95 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 NFYBP25208 207 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 HTR1DP28221 377 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 C17orf58Q2M2W7 97 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 PRAMEF5Q5TYX0 476 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 HCP5Q6MZN7 132 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 MOB1BQ7L9L4 216 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 C6orf201Q7Z4U5 140 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 LDLRAD3Q86YD5 345 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 BEND2Q8NDZ0 799 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 OR5R1Q8NH85 324 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 OR9G1Q8NH87 305 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 FAM216AQ8WUB2 273 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 CCDC107Q8WV48 283 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 RAB3CQ96E17 227 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 NICN1Q9BSH3 213 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 CHMP1AQ9HD42 196 aaPredicted RBP12.54□□□□□ -0.4
HDHD3-203ENST00000485934 ZNF581Q9P0T4 197 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 ABRACLQ9P1F3 81 aa12.54□□□□□ -0.4
HDHD3-203ENST00000485934 SERPINE3A8MV23 424 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 SOCS1O15524 211 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 VENTXO95231 258 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 OMGP23515 440 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 RPL5P46777 297 aaKnown RBP12.53□□□□□ -0.4
HDHD3-203ENST00000485934 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
HDHD3-203ENST00000485934 Q3ZCU0 254 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 IDNKQ5T6J7 187 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 ANKRD13BQ86YJ7 626 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 OR10R2Q8NGX6 335 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 KIRREL1Q96J84 757 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 ZNF48Q96MX3 618 aaPredicted RBP12.53□□□□□ -0.4
HDHD3-203ENST00000485934 SULT4A1Q9BR01 284 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 MEGF9Q9H1U4 602 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 ATG5Q9H1Y0 275 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 MBNL3Q9NUK0 354 aaKnown RBP12.53□□□□□ -0.4
HDHD3-203ENST00000485934 AMMECR1Q9Y4X0 333 aaPredicted RBP12.53□□□□□ -0.4
HDHD3-203ENST00000485934 JMJD1CQ15652 2540 aa12.53□□□□□ -0.4
HDHD3-203ENST00000485934 RNF212BA8MTL3 300 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 ODF3BA8MYP8 253 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 LEUTXA8MZ59 168 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 HOXA3O43365 443 aaPredicted RBP12.52□□□□□ -0.41
HDHD3-203ENST00000485934 CRYBA1P05813 215 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 RNASE1P07998 156 aaKnown RBP12.52□□□□□ -0.41
HDHD3-203ENST00000485934 MELTFP08582 738 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 SLC2A2P11168 524 aaPredicted RBP12.52□□□□□ -0.41
HDHD3-203ENST00000485934 IER3P46695 156 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 DLX1P56177 255 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 LSM3P62310 102 aaKnown RBP12.52□□□□□ -0.41
HDHD3-203ENST00000485934 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.41
HDHD3-203ENST00000485934 C16orf87Q6PH81 154 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 NR2C2APQ86WQ0 139 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 ZDHHC22Q8N966 263 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 DTX3Q8N9I9 347 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 OR4K15Q8NH41 348 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 RFESDQ8TAC1 157 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 NDNFQ8TB73 568 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 GALMQ96C23 342 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 KCTD12Q96CX2 325 aaKnown RBP12.52□□□□□ -0.41
HDHD3-203ENST00000485934 KCNK15Q9H427 330 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 RNF167Q9H6Y7 350 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 C12orf4Q9NQ89 552 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 DPM3Q9P2X0 92 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 SCOCQ9UIL1 159 aa12.52□□□□□ -0.41
HDHD3-203ENST00000485934 TRBV6-6A0A0A6YYG2 114 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 A0A0A6YYH2 397 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 SMIM30A4D0T7 59 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 DNAJC9-AS1A6NH13 148 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 A6NJ64 397 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 OOSP1A8MZH6 123 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 F2RL2O00254 374 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 SDCBPO00560 298 aaPredicted RBP12.51□□□□□ -0.41
HDHD3-203ENST00000485934 MMP23AO75900 390 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 RGS11O94810 467 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 TFAP2AP05549 437 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 CD3GP09693 182 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
HDHD3-203ENST00000485934 ALDH3B2P48448 385 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 TMEM50BP56557 158 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 PRB3Q04118 309 aaPredicted RBP12.51□□□□□ -0.41
HDHD3-203ENST00000485934 SLC9A3R2Q15599 337 aa12.51□□□□□ -0.41
HDHD3-203ENST00000485934 STEAP3Q658P3 488 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms