RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TRAV39A0A0B4J263 110 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 CENPVL3A0A0U1RRI6 287 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 DPPA5A6NC42 116 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 POM121CA8CG34 1229 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 ORC5O43913 435 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 IGHV4-38-2P0DP08 117 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 GNB3P16520 340 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 GZMHP20718 246 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 DLX1P56177 255 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 C6orf183Q5T699 404 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 GPR157Q5UAW9 335 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 HEPN1Q6WQI6 88 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 LHX4Q969G2 390 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 DIABLOQ9NR28 239 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 NUP50Q9UKX7 468 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 SESN1Q9Y6P5 492 aa16.3■□□□□ 0.2
COL6A2-208ENST00000485591 A0A075B6Q4 140 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 NPIPB11E5RHQ5 1161 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 RNASEK-C17orf49H0YIS7 233 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 C15orf65H3BRN8 121 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 APOA1P02647 267 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 GSTP1P09211 210 aaKnown RBP16.29■□□□□ 0.2
COL6A2-208ENST00000485591 SRD5A1P18405 259 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 CDK2P24941 298 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 SSTR5P35346 364 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 GUCA2AQ02747 115 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 PRAMEF5Q5TYX0 476 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 ZNF880Q6PDB4 577 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 ZNF782Q6ZMW2 699 aaPredicted RBP16.29■□□□□ 0.2
COL6A2-208ENST00000485591 MOB1BQ7L9L4 216 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 ZNF554Q86TJ5 538 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 S100A16Q96FQ6 103 aaKnown RBP16.29■□□□□ 0.2
COL6A2-208ENST00000485591 CMSS1Q9BQ75 279 aaKnown RBP16.29■□□□□ 0.2
COL6A2-208ENST00000485591 HDHD3Q9BSH5 251 aaPredicted RBP16.29■□□□□ 0.2
COL6A2-208ENST00000485591 HEXA-AS1Q9H8Q6 139 aa16.29■□□□□ 0.2
COL6A2-208ENST00000485591 ZMAT3Q9HA38 289 aaKnown RBP16.29■□□□□ 0.2
COL6A2-208ENST00000485591 CHMP1AQ9HD42 196 aaPredicted RBP16.29■□□□□ 0.2
COL6A2-208ENST00000485591 MMP23AO75900 390 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 EIF4EP06730 217 aaKnown RBP16.28■□□□□ 0.2
COL6A2-208ENST00000485591 CD3GP09693 182 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 RCC1P18754 421 aaPredicted RBP16.28■□□□□ 0.2
COL6A2-208ENST00000485591 BPIFB3P59826 476 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 KLRD1Q13241 179 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 ZNF260Q3ZCT1 412 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 CDNFQ49AH0 187 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 OR52W1Q6IF63 320 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 HCP5Q6MZN7 132 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 Q6ZPA2 131 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 OR10A7Q8NGE5 316 aa16.28■□□□□ 0.2
COL6A2-208ENST00000485591 SLIRPQ9GZT3 109 aaKnown RBP16.28■□□□□ 0.2
COL6A2-208ENST00000485591 IGHV3OR16-10A0A075B7F0 116 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 IGHV1-69DA0A0B4J2H0 117 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 C12orf77C9JDV5 145 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 XRCC3O43542 346 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 HPGDSO60760 199 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 IGHV1-69P01742 117 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 OMGP23515 440 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 GDNFP39905 211 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 UBE2E1P51965 193 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 MRPS15P82914 257 aaKnown RBP16.27■□□□□ 0.2
COL6A2-208ENST00000485591 PRB3Q04118 309 aaPredicted RBP16.27■□□□□ 0.2
COL6A2-208ENST00000485591 PNLIPRP3Q17RR3 467 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 ARL11Q969Q4 196 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 DGCR14Q96DF8 476 aaKnown RBP16.27■□□□□ 0.2
COL6A2-208ENST00000485591 KIRREL1Q96J84 757 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 TMEM133Q9H2Q1 129 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 RAB9BQ9NP90 201 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 IDI2-AS1Q9NZ38 188 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 KCNIP1Q9NZI2 227 aa16.27■□□□□ 0.2
COL6A2-208ENST00000485591 ANK3Q12955 4377 aaKnown RBP16.26■□□□□ 0.19
COL6A2-208ENST00000485591 TRAV18A0A075B6X5 111 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 FAM157CP0CG43 387 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 ELK1P19419 428 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 EPHA1P21709 976 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 SCGB2A2Q13296 93 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 ARFRP1Q13795 201 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 HMGN3Q15651 99 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 TMEM30BQ3MIR4 351 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 HACD4Q5VWC8 232 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 FOXB2Q5VYV0 432 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 C9orf139Q6ZV77 190 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 OR13D1Q8NGV5 346 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 TAF9BQ9HBM6 251 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 MGAT4AQ9UM21 535 aa16.26■□□□□ 0.19
COL6A2-208ENST00000485591 A0A087X0M5 115 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 A0A1B0GX30 115 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 TMEM235A6NFC5 223 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 F2RL2O00254 374 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 SPINT2O43291 252 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 HBZP02008 142 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 FCGR3AP08637 254 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 COX7A1P24310 79 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 FPR2P25090 351 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 CD34P28906 385 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 PITPNAQ00169 270 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 TMEM69Q5SWH9 247 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 RUSC1-AS1Q66K80 236 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 BRD3OSQ6XYD6 125 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 PDZD9Q8IXQ8 264 aa16.25■□□□□ 0.19
COL6A2-208ENST00000485591 PNKDQ8N490 385 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms