RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 SIRT4Q9Y6E7 314 aaPredicted RBP4.4□□□□□ -1.7
CCDC39-205ENST00000485055 CACNA1DQ01668 2161 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 MAST4O15021 2626 aa4.4□□□□□ -1.7
CCDC39-205ENST00000485055 CELSR2Q9HCU4 2923 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 TMED7-TICAM2A0A0A6YYA0 188 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 A0A0B4J2E0 115 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 A0A1B0GX12 115 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 TMEM72A0PK05 275 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 TSTD3H0UI37 97 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 CLIC3O95833 236 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 PVALBP20472 110 aaPredicted RBP4.4□□□□□ -1.71
CCDC39-205ENST00000485055 IGHV1-2P23083 117 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 MPGP29372 298 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 AKR1C3P42330 323 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 PPOXP50336 477 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 POLR2JP52435 117 aaKnown RBP4.4□□□□□ -1.71
CCDC39-205ENST00000485055 CDH12P55289 794 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 MPPED2Q15777 294 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 PAPPA-AS1Q5QFB9 102 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF613Q6PF04 617 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 FOXL2NBQ6ZUU3 175 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 OLIG3Q7RTU3 272 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 MSRB3Q8IXL7 192 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 CLECL1Q8IZS7 167 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 ARIH2OSQ8N7S6 290 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 TNFAIP8L1Q8WVP5 186 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 TEX37Q96LM6 180 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 MAGEB18Q96M61 343 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 ALKBH3Q96Q83 286 aaPredicted RBP4.4□□□□□ -1.71
CCDC39-205ENST00000485055 MIXL1Q9H2W2 232 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 SLCO1B3Q9NPD5 702 aa4.4□□□□□ -1.71
CCDC39-205ENST00000485055 A0A1W2PP18 115 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR11H12B2RN74 326 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 DLEU1O43261 78 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 SPINT2O43291 252 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CD5LO43866 347 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR2T1O43869 369 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CD8AP01732 235 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 IGHMP01871 453 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 HLA-AP01891 365 aaKnown RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 MT-ND4P03905 459 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR12D1P0DN82 309 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 GATA1P15976 413 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 SLC25A16P16260 332 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OMGP23515 440 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 S100GP29377 79 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 RAB7AP51149 207 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 RAB13P51153 203 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 HIST3H3Q16695 136 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 FAM219BQ5XKK7 198 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 ZCCHC23Q6ZST2 131 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 UEVLDQ8IX04 471 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR11H1Q8NG94 326 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR4F15Q8NGB8 312 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR6N1Q8NGY5 312 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR11H2Q8NH07 326 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 EDARADDQ8WWZ3 215 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OTULINQ96BN8 352 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OR52E6Q96RD3 313 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 VPS25Q9BRG1 176 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 NXF2Q9GZY0 626 aaKnown RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 ABCG5Q9H222 651 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 MAP1LC3AQ9H492 121 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 FAIMQ9NVQ4 179 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 MARCOQ9UEW3 520 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CHD3Q12873 2000 aaKnown RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 DPRXA6NFQ7 191 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 BBIP1A8MTZ0 92 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 EEF1E1-BLOC1S5C9J1V9 151 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF878C9JN71 531 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 HSD17B6O14756 317 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 EEF1E1O43324 174 aaKnown RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 IGKV3-15P01624 115 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 ELF3P78545 371 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 TRAM1Q15629 374 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 SPDYE7PQ495Y7 208 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 TIGD2Q4W5G0 525 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 LPCAT3Q6P1A2 487 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 C8orf82Q6P1X6 216 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CBLL1Q75N03 491 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 ASRGL1Q7L266 308 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 GLCCI1Q86VQ1 547 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 SLC26A10Q8NG04 563 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CASTOR1Q8WTX7 329 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 TMEM54Q969K7 222 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 OXGR1Q96P68 337 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 TPT1P8Q9HAU6 139 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CBLN4Q9NTU7 201 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 MCUBQ9NWR8 336 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 DIDO1Q9BTC0 2240 aaKnown RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 A0A087WUJ7 227 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 S1PR2O95136 353 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 BGLAPP02818 100 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 HOXD3P31249 432 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 RPL35P42766 123 aaKnown RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 SRP9P49458 86 aaKnown RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CD47Q08722 323 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 C12orf54Q6X4T0 127 aa4.39□□□□□ -1.71
CCDC39-205ENST00000485055 ZNF782Q6ZMW2 699 aaPredicted RBP4.39□□□□□ -1.71
CCDC39-205ENST00000485055 CREB3L2Q70SY1 520 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms