RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ITLN2Q8WWU7 325 aaPredicted RBP2.71□□□□□ -1.98
VPS13A-211ENST00000484581 YIPF5Q969M3 257 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 DHRS9Q9BPW9 319 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 PARD6GQ9BYG4 376 aaPredicted RBP2.71□□□□□ -1.98
VPS13A-211ENST00000484581 MS4A6AQ9H2W1 248 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 TMEM216Q9P0N5 145 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 PLXNB3Q9ULL4 1909 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 ABCC11Q96J66 1382 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 PLA2R1Q13018 1463 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 PLB1Q6P1J6 1458 aa2.71□□□□□ -1.98
VPS13A-211ENST00000484581 THADAQ6YHU6 1953 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 CHD2O14647 1828 aaKnown RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 ISLRO14498 428 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 MAGEB4O15481 346 aaPredicted RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 POP7O75817 140 aaKnown RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 ARL6IP5O75915 188 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 NRASP01111 189 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 HRASP01112 189 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 KRASP01116 189 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 TYMSP04818 313 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 SERPINA6P08185 405 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 PTHLHP12272 177 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 NQO1P15559 274 aaKnown RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 ADORA1P30542 326 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 IDH2P48735 452 aaKnown RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 INPP1P49441 399 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 CTAG1AP78358 180 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 SMAGPQ0VAQ4 97 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 C1DQ13901 141 aaKnown RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 IMPG1Q17R60 797 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 ELP2Q6IA86 826 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 DAZ4Q86SG3 579 aaKnown RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 KLF14Q8TD94 323 aaPredicted RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 CYGBQ8WWM9 190 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 ASB13Q8WXK3 278 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 STARD4Q96DR4 205 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 CDCA4Q9BXL8 241 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 DAZ1Q9NQZ3 744 aaKnown RBP2.7□□□□□ -1.98
VPS13A-211ENST00000484581 GLS2Q9UI32 602 aa2.7□□□□□ -1.98
VPS13A-211ENST00000484581 IGLV3-12A0A075B6K2 115 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 GOLGA6L4A6NEF3 574 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 KCNK2O95069 426 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 MLNP12872 115 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 CTSEP14091 401 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 EIF4EBP1Q13541 118 aaPredicted RBP2.69□□□□□ -1.98
VPS13A-211ENST00000484581 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 CST9Q5W186 159 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 LPCAT4Q643R3 524 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 LAIR2Q6ISS4 152 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 FAM131AQ6UXB0 335 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 LRRN1Q6UXK5 716 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 TMEM144Q7Z5S9 345 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 C10orf67Q8IYJ2 551 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 OR5D18Q8NGL1 313 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 ITFG2Q969R8 447 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 PTH2Q96A98 100 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 REEP6Q96HR9 211 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 INIPQ9NRY2 104 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 BRWD3Q6RI45 1802 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 BRD4O60885 1362 aaPredicted RBP2.69□□□□□ -1.98
VPS13A-211ENST00000484581 TICRRQ7Z2Z1 1910 aa2.69□□□□□ -1.98
VPS13A-211ENST00000484581 ARID1AO14497 2285 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 IGHV3-21A0A0B4J1V1 117 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 TRAV40A0A0B4J280 105 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 C21orf140B9A014 251 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 IGLL5B9A064 214 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.68□□□□□ -1.98
VPS13A-211ENST00000484581 M0QYV0 167 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 CXCR6O00574 342 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 MFNGO00587 321 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 CDRT1O95170 752 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 IFNA5P01569 189 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 ISG15P05161 165 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 LINC00614P0C842 121 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 GADD45AP24522 165 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 MIPP30301 263 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 NKX2-5P52952 324 aaPredicted RBP2.68□□□□□ -1.98
VPS13A-211ENST00000484581 H2BFSP57053 126 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 DAD1P61803 113 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 MRPS15P82914 257 aaKnown RBP2.68□□□□□ -1.98
VPS13A-211ENST00000484581 ENDOGQ14249 297 aaKnown RBP2.68□□□□□ -1.98
VPS13A-211ENST00000484581 MMDQ15546 238 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 SPIN4Q56A73 249 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 TNFAIP8L2Q6P589 184 aaPredicted RBP2.68□□□□□ -1.98
VPS13A-211ENST00000484581 TBPL2Q6SJ96 375 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 SCGB1D4Q6XE38 83 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 C16orf47Q6ZP98 133 aaPredicted RBP2.68□□□□□ -1.98
VPS13A-211ENST00000484581 AMN1Q8IY45 258 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 OSR2Q8N2R0 312 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 OR4C13Q8NGP0 309 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 OR9I1Q8NGQ6 314 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 OR10D3Q8NH80 312 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 TNFAIP8L1Q8WVP5 186 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 PAIP2Q9BPZ3 127 aaKnown RBP2.68□□□□□ -1.98
VPS13A-211ENST00000484581 MROQ9BYG7 248 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 TXNIPQ9H3M7 391 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 MAP1LC3AQ9H492 121 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 HRASLSQ9HDD0 168 aa2.68□□□□□ -1.98
VPS13A-211ENST00000484581 PARVAQ9NVD7 372 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms