RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 TOMM20LQ6UXN7 152 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 C11orf42Q8N5U0 333 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
VTI1A-205ENST00000483122 ZCCHC14Q8WYQ9 949 aaKnown RBP10.16□□□□□ -0.78
VTI1A-205ENST00000483122 AGMATQ9BSE5 352 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 ZNF160Q9HCG1 818 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 RNF115Q9Y4L5 304 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 IGKV1-27A0A075B6S5 117 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 MAP1LC3B2A6NCE7 125 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 TMEM150CB9EJG8 249 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 TNFSF13O75888 250 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 NPBWR2P48146 333 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 PRSS12P56730 875 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 SRPXP78539 464 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 COTL1Q14019 142 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 ENDOGQ14249 297 aaKnown RBP10.16□□□□□ -0.78
VTI1A-205ENST00000483122 CISD2Q8N5K1 135 aaKnown RBP10.16□□□□□ -0.78
VTI1A-205ENST00000483122 TMEM234Q8WY98 164 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 FAM131CQ96AQ9 280 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 MAP1LC3BQ9GZQ8 125 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 KNL1Q8NG31 2342 aa10.16□□□□□ -0.78
VTI1A-205ENST00000483122 EFNA2O43921 213 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 IGHG1P01857 330 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 COL9A1P20849 921 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 GCH1P30793 250 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 MDH2P40926 338 aaKnown RBP10.15□□□□□ -0.78
VTI1A-205ENST00000483122 GRB2P62993 217 aaKnown RBP10.15□□□□□ -0.78
VTI1A-205ENST00000483122 HIST1H3AP68431 136 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 HHEXQ03014 270 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 PP6455Q8WZ26 134 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 ABHD14BQ96IU4 210 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 C20orf144Q9BQM9 153 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 PARLQ9H300 379 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 PRDM6Q9NQX0 595 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 TAAR3PQ9P1P4 343 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 PAM16Q9Y3D7 125 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 PPIAL4AQ9Y536 164 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 LRP4O75096 1905 aa10.15□□□□□ -0.78
VTI1A-205ENST00000483122 A0A0G2JRQ6 117 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 C2CD4DB7Z1M9 353 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 YPEL1O60688 119 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 TYMSP04818 313 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 RAB7AP51149 207 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 RBX1P62877 108 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 ARL16Q0P5N6 197 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 MYBPHQ13203 477 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 C1orf61Q13536 156 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 TESK1Q15569 626 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 ZNF818PQ6ZRF7 136 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 OR5T1Q8NG75 326 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 SCGB1C1Q8TD33 95 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 YPEL2Q96QA6 119 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 PLK3Q9H4B4 646 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 SLC7A10Q9NS82 523 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 ALKBH4Q9NXW9 302 aa10.15□□□□□ -0.79
VTI1A-205ENST00000483122 CLEC18AA5D8T8 446 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 ZNF814B7Z6K7 855 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 HMGB3O15347 200 aaKnown RBP10.14□□□□□ -0.79
VTI1A-205ENST00000483122 IFNA1P01562 189 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 UMODP07911 640 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 IL3RAP26951 378 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 RPL15P61313 204 aaKnown RBP10.14□□□□□ -0.79
VTI1A-205ENST00000483122 MEF2BQ02080 365 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-205ENST00000483122 Q6ZWC4 215 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 NUFIP2Q7Z417 695 aaKnown RBP10.14□□□□□ -0.79
VTI1A-205ENST00000483122 CLEC18CQ8NCF0 446 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 GATAD1Q8WUU5 269 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 DDIT4LQ96D03 193 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 MRGPRX4Q96LA9 322 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 YLPM1P49750 1951 aaKnown RBP10.14□□□□□ -0.79
VTI1A-205ENST00000483122 SEC16AO15027 2179 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 TNFRSF10CO14798 259 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 GYPAP02724 150 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 CHRNA7P36544 502 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 IZUMO4Q1ZYL8 232 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 RSPO1Q2MKA7 263 aaPredicted RBP10.14□□□□□ -0.79
VTI1A-205ENST00000483122 TMEM196Q5HYL7 178 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 TPTE2P1Q5T6R2 138 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 PARM1Q6UWI2 310 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 TEX43Q6ZNM6 134 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 GAPTQ8N292 157 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 PLA2G2FQ9BZM2 168 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 MANBALQ9NQG1 85 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 FOXJ2Q9P0K8 574 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 ZFP30Q9Y2G7 519 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 PTRH2Q9Y3E5 179 aaKnown RBP10.14□□□□□ -0.79
VTI1A-205ENST00000483122 TRAPPC1Q9Y5R8 145 aa10.14□□□□□ -0.79
VTI1A-205ENST00000483122 EYSQ5T1H1 3165 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 IGKV3D-11A0A0A0MRZ8 115 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 IGKV1-12A0A0C4DH73 117 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 A0A1W2PNV4 684 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 ANKUB1A6NFN9 424 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 TRAF3IP2O43734 574 aaPredicted RBP10.13□□□□□ -0.79
VTI1A-205ENST00000483122 IGKV1D-12P01611 117 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 VDAC1P21796 283 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 RPS18P62269 152 aaKnown RBP10.13□□□□□ -0.79
VTI1A-205ENST00000483122 SAPCD1Q5SSQ6 148 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 FAM78BQ5VT40 261 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 Q6ZSR6 202 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 YAF2Q8IY57 180 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms