RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 OMGP23515 440 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 CHATP28329 748 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 CD34P28906 385 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 CLDN12P56749 244 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 OR10A3P58181 314 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 ACTG1P63261 375 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 NKAPLQ5M9Q1 402 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 C6orf183Q5T699 404 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 TRAT1Q6PIZ9 186 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 SLC16A12Q6ZSM3 486 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 FAM89BQ8N5H3 189 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 OR5R1Q8NH85 324 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 KIRREL1Q96J84 757 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 CHCHD6Q9BRQ6 235 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 LPAR5Q9H1C0 372 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 KCNK15Q9H427 330 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 RAB22AQ9UL26 194 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 TRAPPC2LQ9UL33 140 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 DNHD1Q96M86 4753 aa13.48□□□□□ -0.25
HMGN1-214ENST00000482733 LOC100506127A0A0U1RQW1 187 aa13.47□□□□□ -0.25
HMGN1-214ENST00000482733 TOR1AO14656 332 aa13.47□□□□□ -0.25
HMGN1-214ENST00000482733 LDLRAD4O15165 306 aa13.47□□□□□ -0.25
HMGN1-214ENST00000482733 IGHV4-59P01825 116 aa13.47□□□□□ -0.25
HMGN1-214ENST00000482733 GADD45AP24522 165 aa13.47□□□□□ -0.25
HMGN1-214ENST00000482733 BLVRBP30043 206 aaPredicted RBP13.47□□□□□ -0.25
HMGN1-214ENST00000482733 PRRX1P54821 245 aa13.47□□□□□ -0.25
HMGN1-214ENST00000482733 RPL15P61313 204 aaKnown RBP13.47□□□□□ -0.25
HMGN1-214ENST00000482733 CREB3L1Q96BA8 519 aa13.47□□□□□ -0.25
HMGN1-214ENST00000482733 AJUBAQ96IF1 538 aa13.47□□□□□ -0.25
HMGN1-214ENST00000482733 TMEM272A0A1B0GTI8 110 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 UBE2QL1A1L167 161 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 NFYBP25208 207 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 HTR1DP28221 377 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 SSTR5P35346 364 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 GDNFP39905 211 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 LRRC75BQ2VPJ9 315 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 TMEM30BQ3MIR4 351 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 LHFPL4Q7Z7J7 247 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 ZNF554Q86TJ5 538 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 OR56B1Q8NGI3 324 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 OR52M1Q8NGK5 317 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 CCDC107Q8WV48 283 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 C17orf50Q8WW18 174 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 DYRK2Q92630 601 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 GCDHQ92947 438 aaPredicted RBP13.46□□□□□ -0.25
HMGN1-214ENST00000482733 ARL11Q969Q4 196 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 PTX4Q96A99 478 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 NICN1Q9BSH3 213 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 LIN7BQ9HAP6 207 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 TNFRSF19Q9NS68 423 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 PLEKHJ1Q9NW61 149 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 HSF4Q9ULV5 492 aa13.46□□□□□ -0.25
HMGN1-214ENST00000482733 A0A0A6YYD4 124 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 TRAV39A0A0B4J263 110 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 TMEM89A2RUT3 159 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 SPINT2O43291 252 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 HKR1P10072 659 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 RAB6AP20340 208 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 SDC2P34741 201 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 C6orf201Q7Z4U5 140 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 OR4P4Q8NGL7 312 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 OR4K15Q8NH41 348 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 OR9G1Q8NH87 305 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 RFESDQ8TAC1 157 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 NDNFQ8TB73 568 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 YIPF6Q96EC8 236 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 SSX3Q99909 188 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 SULT4A1Q9BR01 284 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 FAAP24Q9BTP7 215 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 CHIAQ9BZP6 476 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 RIMS4Q9H426 269 aaPredicted RBP13.45□□□□□ -0.26
HMGN1-214ENST00000482733 ZNF286AQ9HBT8 521 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 KCNIP1Q9NZI2 227 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 DPM3Q9P2X0 92 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 VPREB3Q9UKI3 123 aa13.45□□□□□ -0.26
HMGN1-214ENST00000482733 VGLL3A8MV65 326 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 LEUTXA8MZ59 168 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 C15orf65H3BRN8 121 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 SOCS1O15524 211 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 AIREO43918 545 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 IGLV1-47P01700 117 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 CRYBA1P05813 215 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 CEACAM3P40198 252 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 VEGFCP49767 419 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 BAIAP2L2Q6UXY1 529 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 Q6ZTK2 550 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 NR2C2APQ86WQ0 139 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 MRPL30Q8TCC3 161 aaKnown RBP13.44□□□□□ -0.26
HMGN1-214ENST00000482733 CENPOQ9BU64 300 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 MBNL3Q9NUK0 354 aaKnown RBP13.44□□□□□ -0.26
HMGN1-214ENST00000482733 AMMECR1Q9Y4X0 333 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-214ENST00000482733 DSCAML1Q8TD84 2053 aa13.44□□□□□ -0.26
HMGN1-214ENST00000482733 FAM172BPA6NC97 362 aa13.43□□□□□ -0.26
HMGN1-214ENST00000482733 METTL21EPA6NDL7 271 aa13.43□□□□□ -0.26
HMGN1-214ENST00000482733 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
HMGN1-214ENST00000482733 POM121CA8CG34 1229 aa13.43□□□□□ -0.26
HMGN1-214ENST00000482733 FOXI3A8MTJ6 420 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-214ENST00000482733 C12orf77C9JDV5 145 aa13.43□□□□□ -0.26
HMGN1-214ENST00000482733 F2RL2O00254 374 aa13.43□□□□□ -0.26
HMGN1-214ENST00000482733 TMEM127O75204 238 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms