RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
COL9A2-207ENST00000482722 VAMP2P63027 116 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 ZXDAP98168 799 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 SNAI3Q3KNW1 292 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF665Q9H7R5 613 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 LRFN1Q9P244 771 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 SEMA5BQ9P283 1151 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 DCHS1Q96JQ0 3298 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF154Q13106 437 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 CLN3Q13286 438 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 ADGRG7Q96K78 797 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 DUSP23Q9BVJ7 150 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 SRD5A3Q9H8P0 318 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 PLEK2Q9NYT0 353 aa12.31□□□□□ -0.44
COL9A2-207ENST00000482722 TUBG1P23258 451 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 RPS18P62269 152 aaKnown RBP12.3□□□□□ -0.44
COL9A2-207ENST00000482722 RSPO1Q2MKA7 263 aaPredicted RBP12.3□□□□□ -0.44
COL9A2-207ENST00000482722 GPR137CQ8N3F9 429 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 TMEM105Q8N8V8 129 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 NECAP1Q8NC96 275 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 ANGPTL4Q9BY76 406 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 DOCK10Q96BY6 2186 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 AQP7P3A6NL99 342 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 TRDCB7Z8K6 153 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 CDS2O95674 445 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 MBP02144 154 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 TK1P04183 234 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 GRB2P62993 217 aaKnown RBP12.3□□□□□ -0.44
COL9A2-207ENST00000482722 RAB35Q15286 201 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 TEX38Q6PEX7 206 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF100Q8IYN0 542 aa12.3□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF837Q96EG3 531 aaPredicted RBP12.3□□□□□ -0.44
COL9A2-207ENST00000482722 C3orf85A0A1B0GTC6 90 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 MARCH11A6NNE9 402 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 NPIPA2E9PIF3 369 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 NPIPA3F8WFD2 350 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 BCL2P10415 239 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 TDGF1P13385 188 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 MSR1P21757 451 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 PAX5Q02548 391 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 MOB3AQ96BX8 217 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 LAMP3Q9UQV4 416 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF407Q9C0G0 2248 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 KIAA2026Q5HYC2 2103 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 IGKV1-27A0A075B6S5 117 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 IFNL4K9M1U5 179 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 CEACAM1P13688 526 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 AADACP22760 399 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 SLC25A53Q5H9E4 307 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 COA6Q5JTJ3 125 aaKnown RBP12.29□□□□□ -0.44
COL9A2-207ENST00000482722 SLC25A26Q70HW3 274 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
COL9A2-207ENST00000482722 CISD1Q9NZ45 108 aaKnown RBP12.29□□□□□ -0.44
COL9A2-207ENST00000482722 M0R143 59 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 ADAM20O43506 726 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 DTYMKP23919 212 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 TDGF1P3P51864 188 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 FGF8P55075 233 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-207ENST00000482722 TAS2R30P59541 319 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 ERVS71-1P61550 626 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 PMS2P11Q13670 270 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 CLEC12BQ2HXU8 276 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 LCN15Q6UWW0 184 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF66Q6ZN08 573 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 CCDC71LQ8N9Z2 235 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 GJC3Q8NFK1 279 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 SVILO95425 2214 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 M0R135 149 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 ETV2O00321 342 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-207ENST00000482722 MPPED1O15442 326 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 IGLV3-1P01715 115 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 PATE4P0C8F1 98 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 GZMHP20718 246 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 IL22RA1Q8N6P7 574 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF799Q96GE5 643 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 ARRDC1-AS1Q9H2J1 176 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 VAX2Q9UIW0 290 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 CHCHD2Q9Y6H1 151 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-207ENST00000482722 TRAV1-1A0A0B4J248 108 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 HLA-HP01893 362 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 PFN1P07737 140 aaKnown RBP12.28□□□□□ -0.44
COL9A2-207ENST00000482722 CCL3P10147 92 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 NUBP1P53384 320 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 HERV-K104P61576 105 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 EIF3IQ13347 325 aaKnown RBP12.28□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF787Q6DD87 383 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 ZNF695Q8IW36 515 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 CTDSP1Q9GZU7 261 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 TMEM222Q9H0R3 208 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 HIPK2Q9H2X6 1198 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 C19orf25Q9UFG5 118 aaPredicted RBP12.28□□□□□ -0.44
COL9A2-207ENST00000482722 V9GYS6 101 aa12.28□□□□□ -0.44
COL9A2-207ENST00000482722 TP53I11O14683 189 aa12.27□□□□□ -0.45
COL9A2-207ENST00000482722 ENDOGQ14249 297 aaKnown RBP12.27□□□□□ -0.45
COL9A2-207ENST00000482722 ADIRFQ15847 76 aa12.27□□□□□ -0.45
COL9A2-207ENST00000482722 HIST3H3Q16695 136 aa12.27□□□□□ -0.45
COL9A2-207ENST00000482722 SPIN3Q5JUX0 258 aa12.27□□□□□ -0.45
COL9A2-207ENST00000482722 DPPA3Q6W0C5 159 aa12.27□□□□□ -0.45
COL9A2-207ENST00000482722 PP6455Q8WZ26 134 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms