RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 FAM90A7PA6NKC0 464 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 FAM90A23PA8MXZ1 464 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 CCRL2O00421 344 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 HSD17B6O14756 317 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 GEMIN2O14893 280 aaKnown RBP9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 TXNL1O43396 289 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 CA11O75493 328 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 CDRT1O95170 752 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 BAG2O95816 211 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 CD1AP06126 327 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 SNRNP70P08621 437 aaKnown RBP9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 TMEM11P17152 192 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 SERPINA2P20848 420 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 IL3RAP26951 378 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 EBI3Q14213 229 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 TCTEX1D4Q5JR98 221 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 TRAT1Q6PIZ9 186 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 IZUMO1Q8IYV9 350 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 STX19Q8N4C7 294 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 C5orf56Q8N8D9 126 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 OR51D1Q8NGF3 324 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 OR56B4Q8NH76 319 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 SGCDQ92629 289 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 GHSRQ92847 366 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 PGLYRP3Q96LB9 341 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 ZNF184Q99676 751 aaPredicted RBP9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 RCC2Q9P258 522 aaKnown RBP9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 ING4Q9UNL4 249 aa9.64□□□□□ -0.87
SQSTM1-207ENST00000481335 EFCAB10A6NFE3 127 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 C15orf65H3BRN8 121 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 GAPDHP04406 335 aaKnown RBP9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 GLAP06280 429 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 MAPK3P27361 379 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 GNG10P50151 68 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 LOXL3P58215 753 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 SLC35B1P78383 322 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 HES1Q14469 280 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 ZNF497Q6ZNH5 498 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 ZNF554Q86TJ5 538 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 DHRSXQ8N5I4 330 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 DRAM1Q8N682 238 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 NKAIN3Q8N8D7 197 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 ZNF485Q8NCK3 441 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 MRAPQ8TCY5 172 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 ZFP57Q9NU63 452 aa9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 AURKAIP1Q9NWT8 199 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 SIRT4Q9Y6E7 314 aaPredicted RBP9.63□□□□□ -0.87
SQSTM1-207ENST00000481335 TRBV5-7A0A0A0MS05 114 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 IGHV1-3A0A0C4DH29 117 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 A0A1W2PRX2 142 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 MCRIP1C9JLW8 97 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 AIPO00170 330 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 LALBAP00709 142 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 IGKV1D-33P01593 117 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 IGKV1-33P01594 117 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 IGHG2P01859 326 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 ZNF137PP52743 207 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 RPS11P62280 158 aaKnown RBP eCLIP9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 ADARB1P78563 741 aaKnown RBP9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 DOC2BQ14184 412 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 SLC22A6Q4U2R8 563 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 C9orf152Q5JTZ5 239 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 UTF1Q5T230 341 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 ATAD3CQ5T2N8 411 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 C6orf183Q5T699 404 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 FOXB2Q5VYV0 432 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 STEAP3Q658P3 488 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 TGIF2LXQ8IUE1 241 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 FOXRED2Q8IWF2 684 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 GAPTQ8N292 157 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 OR8H1Q8NGG4 311 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 RFESDQ8TAC1 157 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 NEK7Q8TDX7 302 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 CYGBQ8WWM9 190 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 ARL11Q969Q4 196 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 GON7Q9BXV9 100 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 LIN7CQ9NUP9 197 aaKnown RBP9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 GFOD1Q9NXC2 390 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 GHRLQ9UBU3 117 aa9.62□□□□□ -0.87
SQSTM1-207ENST00000481335 SDCBPO00560 298 aaPredicted RBP9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 MYL12BO14950 172 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 SPINT2O43291 252 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 SC5DO75845 299 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 MT-ND4P03905 459 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 CD1BP29016 333 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 WNT4P56705 351 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 ST3GAL4Q11206 333 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 LTC4SQ16873 150 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 KHDC1LQ5JSQ8 128 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 AWAT2Q6E213 333 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 SLC35E3Q7Z769 313 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 C8orf59Q8N0T1 100 aaPredicted RBP9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 OR13C5Q8NGS8 318 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 OR2T10Q8NGZ9 312 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 GGHQ92820 318 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 LEAP2Q969E1 77 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 UQCC2Q9BRT2 126 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 MCRIP2Q9BUT9 160 aaKnown RBP9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 PLCXD1Q9NUJ7 323 aa9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 CLEC2DQ9UHP7 191 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms