RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ASXL3Q9C0F0 2248 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 BRS3P32247 399 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 TEX29Q8N6K0 151 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 UBALD1Q8TB05 177 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 TMEM68Q96MH6 324 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 CLDN14O95500 239 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 C9orf152Q5JTZ5 239 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 FBLN5Q9UBX5 448 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 KCNK7Q9Y2U2 307 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 ACKR3P25106 362 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 GGNBP1Q5YKI7 109 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 ALKAL2Q6UX46 152 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 OR5M8Q8NGP6 311 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 KLHDC3Q9BQ90 382 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 NMES1Q9C002 83 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 TREM2Q9NZC2 230 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 BCL2L11O43521 198 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 Q6ZRG5 221 aa16.51■□□□□ 0.23
CCM2-214ENST00000481194 CLEC18AA5D8T8 446 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 GYPAP02724 150 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 BSPH1Q075Z2 132 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 POC1AQ8NBT0 407 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 CLEC18CQ8NCF0 446 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 OR5B12Q96R08 314 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 PROK2Q9HC23 129 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 HMGN3Q15651 99 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 FAM219AQ8IW50 185 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 FAM213BQ8TBF2 198 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 KIR2DL2P43627 348 aaPredicted RBP16.5■□□□□ 0.23
CCM2-214ENST00000481194 GHITMQ9H3K2 345 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 COX7A1P24310 79 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 MPV17P39210 176 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 HIST1H3AP68431 136 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 SP6Q3SY56 376 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 HIST2H3PS2Q5TEC6 136 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 CLEC18BQ6UXF7 455 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 HIST2H3AQ71DI3 136 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 HSD17B11Q8NBQ5 300 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 LINC01560Q8TB33 94 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 STARD4Q96DR4 205 aa16.5■□□□□ 0.23
CCM2-214ENST00000481194 IGHV1-69-2A0A0G2JMI3 117 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 RAB5CP51148 216 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 SCGB2A2Q13296 93 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 GAPTQ8N292 157 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 FAM169BQ8N8A8 192 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 OR2G3Q8NGZ4 309 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 CCL13Q99616 98 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 SLC2A9Q9NRM0 540 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 SLC35D1Q9NTN3 355 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 A0A0G2JK05 382 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 A0A1B0GV50 99 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 KRASP01116 189 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 APOC3P02656 99 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 PPT1P50897 306 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 PLAURQ03405 335 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 DOLPP1Q86YN1 238 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 PIMREGQ9BSJ6 248 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 RNF24Q9Y225 148 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 MOGAT2Q3SYC2 334 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 CCDC144NLQ6NUI1 221 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 MRPL24Q96A35 216 aaKnown RBP16.49■□□□□ 0.23
CCM2-214ENST00000481194 C14orf79Q96F83 325 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 PQLC2LA1A4F0 135 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 F8W036 122 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 IAPPP10997 89 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 ZNF596Q8TC21 504 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 SLC25A32Q9H2D1 315 aa16.49■□□□□ 0.23
CCM2-214ENST00000481194 WDR89Q96FK6 387 aaPredicted RBP16.49■□□□□ 0.23
CCM2-214ENST00000481194 RALGAPA1Q6GYQ0 2036 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 STUMQ69YW2 141 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 HRH4Q9H3N8 390 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 VDAC1P21796 283 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 ETFRF1Q6IPR1 90 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 ZNF826PQ6ZT77 177 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 SOX7Q9BT81 388 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 CACNA1EQ15878 2313 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 LANCL1O43813 399 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 SLC35E4Q6ICL7 350 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 ZNF66Q6ZN08 573 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 OR10S1Q8NGN2 331 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 A0A1W2PP11 408 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 S100A12P80511 92 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 FHL1Q13642 323 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 RNF138Q8WVD3 245 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 CCL28Q9NRJ3 127 aa16.48■□□□□ 0.23
CCM2-214ENST00000481194 ZNF14P17017 642 aaPredicted RBP16.47■□□□□ 0.23
CCM2-214ENST00000481194 NKX6-1P78426 367 aaPredicted RBP16.47■□□□□ 0.23
CCM2-214ENST00000481194 PRSS54Q6PEW0 395 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 HDHD3Q9BSH5 251 aaPredicted RBP16.47■□□□□ 0.23
CCM2-214ENST00000481194 PDLIM4P50479 330 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 RAB5BP61020 215 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 PSG7Q13046 419 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 DOCK9Q9BZ29 2069 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 A8MXE2 369 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 MFNGO00587 321 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 MMP7P09237 267 aaPredicted RBP16.47■□□□□ 0.23
CCM2-214ENST00000481194 ACOT6Q3I5F7 207 aaPredicted RBP16.47■□□□□ 0.23
CCM2-214ENST00000481194 TGIF2LYQ8IUE0 185 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 TGIF2LXQ8IUE1 241 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 DYRK2Q92630 601 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms