RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RCC2Q9P258 522 aaKnown RBP9.17□□□□□ -0.94
CCM2-213ENST00000480658 PSORS1C1Q9UIG5 152 aa9.17□□□□□ -0.94
CCM2-213ENST00000480658 MRPS28Q9Y2Q9 187 aaKnown RBP9.17□□□□□ -0.94
CCM2-213ENST00000480658 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
CCM2-213ENST00000480658 SDCBPO00560 298 aaPredicted RBP9.16□□□□□ -0.94
CCM2-213ENST00000480658 KCNAB3O43448 404 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 GAPDHP04406 335 aaKnown RBP9.16□□□□□ -0.94
CCM2-213ENST00000480658 TMEM11P17152 192 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 CELP19835 753 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 PSMA1P25786 263 aaKnown RBP9.16□□□□□ -0.94
CCM2-213ENST00000480658 BLCAPP62952 87 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 GPR50Q13585 617 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 TRAM1Q15629 374 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 ABCA11PQ4W5N1 156 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 KPRPQ5T749 579 aaPredicted RBP9.16□□□□□ -0.94
CCM2-213ENST00000480658 XAF1Q6GPH4 301 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 ZNF497Q6ZNH5 498 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 AHSA2Q719I0 299 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 FOXRED2Q8IWF2 684 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 LINC00311Q8N616 119 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 ZNF485Q8NCK3 441 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 OR5AU1Q8NGC0 362 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 OR51D1Q8NGF3 324 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 OR10K1Q8NGX5 313 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 CHPT1Q8WUD6 406 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 FBLIM1Q8WUP2 373 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 PHYHIPQ92561 330 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 GGHQ92820 318 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 OR14A2Q96R54 314 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 OCSTAMPQ9BR26 566 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 KCNIP1Q9NZI2 227 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 ZMAT5Q9UDW3 170 aaKnown RBP9.16□□□□□ -0.94
CCM2-213ENST00000480658 PSG11Q9UQ72 335 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 LRRC42Q9Y546 428 aa9.16□□□□□ -0.94
CCM2-213ENST00000480658 TRBV5-7A0A0A0MS05 114 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 FAM172BPA6NC97 362 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 FAM90A9PA6NNJ1 464 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 HSD17B6O14756 317 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 RGS11O94810 467 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 BPNT1O95861 308 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 SSTR5P35346 364 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 SLC35A2P78381 396 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 CD83Q01151 205 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 HES1Q14469 280 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 HABP2Q14520 560 aaPredicted RBP9.15□□□□□ -0.94
CCM2-213ENST00000480658 NSUN5P1Q3KNT7 163 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 GLT8D1Q68CQ7 371 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 GLIPR1L1Q6UWM5 242 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 IZUMO1Q8IYV9 350 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 NANOGP1Q8N7R0 232 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 C11orf44Q8N8P7 122 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 BPIFB6Q8NFQ5 453 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 OR56B4Q8NH76 319 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 ARL11Q969Q4 196 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 DERL3Q96Q80 235 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 CITED2Q99967 270 aaPredicted RBP9.15□□□□□ -0.94
CCM2-213ENST00000480658 ETAA1Q9NY74 926 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 CLEC2DQ9UHP7 191 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 TRAPPC2LQ9UL33 140 aa9.15□□□□□ -0.94
CCM2-213ENST00000480658 RRP9O43818 475 aaKnown RBP9.14□□□□□ -0.95
CCM2-213ENST00000480658 CRTAPO75718 401 aaPredicted RBP9.14□□□□□ -0.95
CCM2-213ENST00000480658 SC5DO75845 299 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 PF4P02776 101 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 CD28P10747 220 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 MGMTP16455 207 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 CD33P20138 364 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 FUT3P21217 361 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 HSPA13P48723 471 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 RPS11P62280 158 aaKnown RBP eCLIP9.14□□□□□ -0.95
CCM2-213ENST00000480658 SAMD5Q5TGI4 173 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 RAB12Q6IQ22 244 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 RNF144BQ7Z419 303 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 OR2T10Q8NGZ9 312 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 PLPPR1Q8TBJ4 325 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 TFAP2CQ92754 450 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 MUL1Q969V5 352 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 RCC1LQ96I51 464 aaKnown RBP9.14□□□□□ -0.95
CCM2-213ENST00000480658 FKBP14Q9NWM8 211 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 GFOD1Q9NXC2 390 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 GNG12Q9UBI6 72 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 MGAT4AQ9UM21 535 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 TPRKBQ9Y3C4 175 aa9.14□□□□□ -0.95
CCM2-213ENST00000480658 TRAV8-7A0A075B6U6 113 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 A0A1W2PPI3 338 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 TCRBV4S1A1TA0A5B7 111 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 PSMB11A5LHX3 300 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 ARL6IP5O75915 188 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 LALBAP00709 142 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 MAS1P04201 325 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 CDK1P06493 297 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 SNRNP70P08621 437 aaKnown RBP9.13□□□□□ -0.95
CCM2-213ENST00000480658 CD1BP29016 333 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 GDNFP39905 211 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 GNG10P50151 68 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 ZNF137PP52743 207 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 GABPB1Q06547 395 aaPredicted RBP9.13□□□□□ -0.95
CCM2-213ENST00000480658 DCTN2Q13561 401 aaKnown RBP9.13□□□□□ -0.95
CCM2-213ENST00000480658 SYT6Q5T7P8 510 aaPredicted RBP9.13□□□□□ -0.95
CCM2-213ENST00000480658 MOB1BQ7L9L4 216 aa9.13□□□□□ -0.95
CCM2-213ENST00000480658 TGIF2LXQ8IUE1 241 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms