RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 MOGAT1Q96PD6 335 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 NXF2Q9GZY0 626 aaKnown RBP8.43□□□□□ -1.06
VEGFA-212ENST00000480614 TGIF2LYQ8IUE0 185 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF441Q8N8Z8 693 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 C3orf80F5H4A9 247 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 APCSP02743 223 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 HOXD4P09016 255 aaPredicted RBP8.43□□□□□ -1.06
VEGFA-212ENST00000480614 METAP1P53582 386 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 LINC00862A6NCI5 91 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 M0R296 226 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 CLEC12BQ2HXU8 276 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 TCTN1Q2MV58 587 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 CNTD2Q9H8S5 307 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 PRSS50Q9UI38 385 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 TMPRSS2O15393 492 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 RPL24P83731 157 aaKnown RBP8.43□□□□□ -1.06
VEGFA-212ENST00000480614 OR5A2Q8NGI9 324 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 ZFP30Q9Y2G7 519 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 ANKHD1Q8IWZ3 2542 aaKnown RBP8.43□□□□□ -1.06
VEGFA-212ENST00000480614 IGHV1OR21-1A0A087WYE8 117 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 TGFBR1P36897 503 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 UCNP55089 124 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 HMGCLL1Q8TB92 370 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 IFNL4K9M1U5 179 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 SCMH1Q96GD3 660 aa8.43□□□□□ -1.06
VEGFA-212ENST00000480614 MBD1Q9UIS9 605 aaPredicted RBP8.43□□□□□ -1.06
VEGFA-212ENST00000480614 GCGP01275 180 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 LGALSLQ3ZCW2 172 aaPredicted RBP8.42□□□□□ -1.06
VEGFA-212ENST00000480614 OR2Y1Q8NGV0 311 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 CDC42EP3Q9UKI2 254 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 ZMIZ1Q9ULJ6 1067 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 LRP5O75197 1615 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 WNT1P04628 370 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 TRIP6Q15654 476 aaKnown RBP8.42□□□□□ -1.06
VEGFA-212ENST00000480614 ST3GAL2Q16842 350 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 C10orf113Q5VZT2 155 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 D2HGDHQ8N465 521 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 OR1N2Q8NGR9 330 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 RNF122Q9H9V4 155 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 ARHGAP21Q5T5U3 1957 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 A0A1W2PQD3 144 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 CTLA4P16410 223 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 INPP5JQ15735 1006 aaPredicted RBP8.42□□□□□ -1.06
VEGFA-212ENST00000480614 PRICKLE4Q2TBC4 344 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 STARD4Q96DR4 205 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 CTXND1A0A1B0GTU2 59 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 CAMPP49913 170 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 GAMTQ14353 236 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 GHITMQ9H3K2 345 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF552Q9H707 407 aaPredicted RBP8.42□□□□□ -1.06
VEGFA-212ENST00000480614 RHBDL1O75783 438 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 LYZL6O75951 148 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 COMPP49747 757 aaPredicted RBP8.42□□□□□ -1.06
VEGFA-212ENST00000480614 TP53I13Q8NBR0 393 aaPredicted RBP8.42□□□□□ -1.06
VEGFA-212ENST00000480614 MARVELD3Q96A59 401 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 METTL26Q96S19 204 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 DOK5Q9P104 306 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 SYNGR2O43760 224 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 TCTAP57738 103 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 RHBDD2Q6NTF9 364 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 DHRS13Q6UX07 377 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 CALHM1Q8IU99 346 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 GEMIN2O14893 280 aaKnown RBP8.42□□□□□ -1.06
VEGFA-212ENST00000480614 PRR35P0CG20 571 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 HTRA3P83110 453 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 ERASQ7Z444 233 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 OR8A1Q8NGG7 326 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 RFESDQ8TAC1 157 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 HARBI1Q96MB7 349 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 SRD5A3Q9H8P0 318 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 SLC35B1P78383 322 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 FMODQ06828 376 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 RBM14Q96PK6 669 aaKnown RBP8.42□□□□□ -1.06
VEGFA-212ENST00000480614 COX6CP09669 75 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 CLDN18P56856 261 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 ISXQ2M1V0 245 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 BSXQ3C1V8 233 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 GLCCI1Q86VQ1 547 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 SLC52A3Q9NQ40 469 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 K7ERU9 68 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 TP53RKQ96S44 253 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 PITPNC1Q9UKF7 332 aa8.42□□□□□ -1.06
VEGFA-212ENST00000480614 HMGA2P52926 109 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 XAF1Q6GPH4 301 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 CEBPDP49716 269 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-212ENST00000480614 PTX4Q96A99 478 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 EPHA8P29322 1005 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-212ENST00000480614 RAB32Q13637 225 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 SSX1Q16384 188 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-212ENST00000480614 OR5AU1Q8NGC0 362 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 A0A1W2PS18 150 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF98A6NK75 572 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 PITX3O75364 302 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 SLC35E4Q6ICL7 350 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 P2RX4Q99571 388 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 TXNDC17Q9BRA2 123 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 PLA2G3Q9NZ20 509 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 HIGD1AQ9Y241 93 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 ERVS71-1P61550 626 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms