RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 IZUMO4Q1ZYL8 232 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 FOXL2NBQ6ZUU3 175 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 SSX7Q7RTT5 188 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 CALHM1Q8IU99 346 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 MAML2Q8IZL2 1156 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 GAPTQ8N292 157 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 OR2Y1Q8NGV0 311 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 CPNE4Q96A23 557 aaPredicted RBP11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 MISP3Q96FF7 219 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF665Q9H7R5 613 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 DEPPQ9NTK1 212 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 TCFL5Q9UL49 500 aa11.42□□□□□ -0.58
PDZRN3-208ENST00000479530 ELOA3CA0A087WX78 387 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 LOC102723971A0A1B0GUV8 181 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 PINLYPA6NC86 204 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 NTN3O00634 580 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 LCATP04180 440 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 CRYGSP22914 178 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 PAX9P55771 341 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 TLE1Q04724 770 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 WIPI1Q5MNZ9 446 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 THNSL2Q86YJ6 484 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 IL22RA1Q8N6P7 574 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 SPTSSAQ969W0 71 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF845Q96IR2 970 aaPredicted RBP11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 TMEM56Q96MV1 263 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 RSG1Q9BU20 258 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 TMEM56-RWDD3S4R434 201 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 CFAP47Q6ZTR5 3102 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 A0A087WZY1 265 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 PDCD6O75340 191 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 NRASP01111 189 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 SNRPCP09234 159 aaKnown RBP11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 MMP9P14780 707 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF32P17041 273 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 SPINK2P20155 84 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 RAC1P63000 192 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 NMSQ5H8A3 153 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 OR13D1Q8NGV5 346 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 C10orf35Q96D05 121 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 HS3ST6Q96QI5 342 aa11.41□□□□□ -0.58
PDZRN3-208ENST00000479530 A0A0G2JRQ6 117 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 TRAPPC6AO75865 159 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 SCTP09683 121 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 TCN2P20062 427 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 EXT1Q16394 746 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 FAM27BQ5VT28 67 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 LCN15Q6UWW0 184 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 ASCL4Q6XD76 172 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 GGNQ86UU5 652 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 C1orf87Q8N0U7 546 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 SNIP1Q8TAD8 396 aaKnown RBP11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 M1APQ8TC57 530 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 NCKAP5O14513 1909 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 A0A1B0GU03 582 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 C9J4A7 227 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 SYNGR3O43761 229 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 CBR3O75828 277 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 CARD18P57730 90 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 ID3Q02535 119 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 TLE4Q04727 773 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 TMEM267Q0VDI3 215 aaPredicted RBP11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 MALLQ13021 153 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 TCEAL6Q6IPX3 200 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF295-AS1Q8N0V1 137 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 TMEM105Q8N8V8 129 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 RBMXL1Q96E39 390 aaKnown RBP11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 GNPNAT1Q96EK6 184 aaPredicted RBP11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 CDX2Q99626 313 aaPredicted RBP11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 RPRMQ9NS64 109 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 TAAR3PQ9P1P4 343 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 RNF115Q9Y4L5 304 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 ARHGAP21Q5T5U3 1957 aa11.4□□□□□ -0.58
PDZRN3-208ENST00000479530 TSTD3H0UI37 97 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 HSPB6O14558 160 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 COX5BP10606 129 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 TAS2R30P59541 319 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 PSG4Q00888 419 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 HERPUD1Q15011 391 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 CNN3Q15417 329 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 ZNF726P1Q15940 193 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 CYB5R2Q6BCY4 276 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 ABHD3Q8WU67 409 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 LURAP1Q96LR2 239 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 ZNF716A6NP11 495 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 PCP4P48539 62 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 RBM11P57052 281 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 MRPS34P82930 218 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 ZNF92Q03936 586 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 TRIM61Q5EBN2 209 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 C9orf135Q5VTT2 229 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 TIPARPQ7Z3E1 657 aaKnown RBP11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 PPP1R32Q7Z5V6 425 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 NEU1Q99519 415 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 ATP5SQ99766 215 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 CCL28Q9NRJ3 127 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 LRRC3CA6NJW4 275 aa11.39□□□□□ -0.59
PDZRN3-208ENST00000479530 CLDN34H7C241 214 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms