RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CCDC32Q9BV29 185 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 ST6GALNAC5Q9BVH7 336 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 CHMP1AQ9HD42 196 aaPredicted RBP10.79□□□□□ -0.68
CHD3-210ENST00000479080 RPUSD1Q9UJJ7 312 aaKnown RBP10.79□□□□□ -0.68
CHD3-210ENST00000479080 TBC1D24Q9ULP9 559 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 PCDHB10Q9UN67 800 aa10.79□□□□□ -0.68
CHD3-210ENST00000479080 MALRD1Q5VYJ5 2156 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 NPIPB11E5RHQ5 1161 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 PLA2G10O15496 165 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 UPK1BO75841 260 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 CD74P04233 296 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 CBX5P45973 191 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 NPY4RP50391 375 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 DLX1P56177 255 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 GNB2P62879 340 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 RPL31P62899 125 aaKnown RBP10.78□□□□□ -0.68
CHD3-210ENST00000479080 LCN2P80188 198 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 MEF2CQ06413 473 aaPredicted RBP10.78□□□□□ -0.68
CHD3-210ENST00000479080 LOXL1Q08397 574 aaPredicted RBP10.78□□□□□ -0.68
CHD3-210ENST00000479080 SRSF7Q16629 238 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHD3-210ENST00000479080 ESCO2Q56NI9 601 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 STEAP3Q658P3 488 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 FAAP20Q6NZ36 180 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 FAM185AQ8N0U4 392 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 BEST4Q8NFU0 473 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 SETD6Q8TBK2 473 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 C15orf40Q8WUR7 153 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 CABLES2Q9BTV7 478 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 REG4Q9BYZ8 158 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 TINAGL1Q9GZM7 467 aaPredicted RBP10.78□□□□□ -0.68
CHD3-210ENST00000479080 RIMS4Q9H426 269 aaPredicted RBP10.78□□□□□ -0.68
CHD3-210ENST00000479080 TAF9BQ9HBM6 251 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 MMP26Q9NRE1 261 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 ABCB10Q9NRK6 738 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 CALYQ9NYX4 217 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 TRAPPC2LQ9UL33 140 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 POLR3KQ9Y2Y1 108 aaPredicted RBP10.78□□□□□ -0.68
CHD3-210ENST00000479080 LINC00312Q9Y6C7 94 aa10.78□□□□□ -0.68
CHD3-210ENST00000479080 TRBV23-1A0A0A0MS06 115 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 M0QYG6 137 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 FABP7O15540 132 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 RBBP9O75884 186 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 HBZP02008 142 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 CD3DP04234 171 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 ZNF735P0CB33 412 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 HLA-DMAP28067 261 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 BTCP35070 178 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 GNMTQ14749 295 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 IGSF11Q5DX21 431 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 MOB1BQ7L9L4 216 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 LDLRAD3Q86YD5 345 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 Q8N7P7 452 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 TMEM229BQ8NBD8 167 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 RAB39BQ96DA2 213 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 PARP12Q9H0J9 701 aaKnown RBP10.77□□□□□ -0.69
CHD3-210ENST00000479080 LINC00574Q9H8X3 128 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 ZNF286AQ9HBT8 521 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 LPAR2Q9HBW0 351 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 IFT46Q9NQC8 304 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 ANXA10Q9UJ72 324 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 CR1P17927 2039 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 DSCAML1Q8TD84 2053 aa10.77□□□□□ -0.69
CHD3-210ENST00000479080 LOC105371242A0A075B767 164 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 IGHV2-70DA0A0C4DH43 119 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 hADV38S2A0JD32 116 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 POM121CA8CG34 1229 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 TRDCB7Z8K6 153 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 GPR37O15354 613 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 PMP2P02689 132 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 OMGP23515 440 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 SSBP1Q04837 148 aaKnown RBP10.76□□□□□ -0.69
CHD3-210ENST00000479080 PRAMEF5Q5TYX0 476 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 OR4C16Q8NGL9 310 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 RFESDQ8TAC1 157 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 BORCS5Q969J3 196 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 MRGPRFQ96AM1 343 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 KIRREL1Q96J84 757 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 OR6C3Q9NZP0 311 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 OR1A1Q9P1Q5 309 aa10.76□□□□□ -0.69
CHD3-210ENST00000479080 UBE2J1Q9Y385 318 aaPredicted RBP10.76□□□□□ -0.69
CHD3-210ENST00000479080 TRGV10A0A0A0MS01 117 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 IGHV3-43A0A0B4J1X8 118 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 PPIAL4CA0A0B4J2A2 164 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 KBTBD11-OT1A0A1B0GTJ5 212 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 FUOMA2VDF0 154 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 ZNF729A6NN14 1252 aaPredicted RBP10.75□□□□□ -0.69
CHD3-210ENST00000479080 C17orf98A8MV24 154 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 H7C1Q1 480 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 F2RL2O00254 374 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 SDCBPO00560 298 aaPredicted RBP10.75□□□□□ -0.69
CHD3-210ENST00000479080 PPIAL4GP0DN37 164 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 IGHV3-43DP0DP04 118 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 IGHV4-31P0DP07 118 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 HRH1P35367 487 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 RFX2P48378 723 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 LOXL3P58215 753 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 ACTBP60709 375 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 ACTG1P63261 375 aa10.75□□□□□ -0.69
CHD3-210ENST00000479080 MRPS15P82914 257 aaKnown RBP10.75□□□□□ -0.69
CHD3-210ENST00000479080 PRB3Q04118 309 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms