RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 COL21A1Q96P44 957 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PANX1Q96RD7 426 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 HBEGFQ99075 208 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 DOHHQ9BU89 302 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 GABARAPL3Q9BY60 117 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 ANGPTL4Q9BY76 406 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 AUNIPQ9H7T9 357 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 LRTM1Q9HBL6 345 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PROK2Q9HC23 129 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLCO1B3Q9NPD5 702 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF331Q9NQX6 463 aaPredicted RBP2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 C1orf109Q9NX04 203 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 TAS2R9Q9NYW1 312 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 FAM215AQ9Y5M1 114 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 ARFGEF3Q5TH69 2177 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 CENPEQ02224 2701 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 ADGRG4Q8IZF6 3080 aa2.6□□□□□ -1.99
CDC42BPA-212ENST00000478573 PRR14LQ5THK1 2151 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 PDZD2O15018 2839 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 SERTM2A0A1B0GWG4 89 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 A0A1W2PQD3 144 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 PLAC8L1A1L4L8 177 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 PRSS37A4D1T9 235 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 SMIM23A6NLE4 172 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 GYG2O15488 501 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 DENRO43583 198 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 SS18L1O75177 396 aaPredicted RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 UGT2B11O75310 529 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CBR3O75828 277 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CLIC3O95833 236 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 SERPINE1P05121 402 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CRHP06850 196 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 BPGMP07738 259 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 RPSAP08865 295 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ELK4P28324 431 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 EVI2BP34910 448 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 HRH1P35367 487 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLCO1A2P46721 670 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 RPS10P46783 165 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CX3CR1P49238 355 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 NCBP2P52298 156 aaKnown RBP eCLIP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 FOXA1P55317 472 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 DSCR4P56555 118 aaPredicted RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ACTA2P62736 377 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ACTG2P63267 376 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ACTC1P68032 377 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ACTA1P68133 377 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 TFF3Q07654 80 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 C2orf80Q0P641 193 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ECH1Q13011 328 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 RCAN2Q14206 197 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNHIT3Q15649 155 aaPredicted RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM183BQ1AE95 376 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 PGGHGQ32M88 737 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 LIN52Q52LA3 116 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ATP6AP1LQ52LC2 224 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 HHATQ5VTY9 493 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CLEC6AQ6EIG7 209 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 NOXRED1Q6NXP6 359 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ANGPTL8Q6UXH0 198 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 C16orf47Q6ZP98 133 aaPredicted RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 LINC00173Q6ZV60 143 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 LUZP2Q86TE4 346 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM183AQ8IXX5 376 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 STPG2Q8N412 459 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF433Q8N7K0 673 aaPredicted RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CCNYL1Q8N7R7 359 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CDRT4Q8N9R6 151 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR1J4Q8NGS1 313 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR9A2Q8NGT5 310 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CDC26Q8NHZ8 85 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLC7A13Q8TCU3 470 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 TCP10LQ8TDR4 215 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 GIMAP1Q8WWP7 306 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 POP5Q969H6 163 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 EXOSC8Q96B26 276 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 PPWD1Q96BP3 646 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 PPCDCQ96CD2 204 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CMTM5Q96DZ9 223 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 DUS3LQ96G46 650 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF799Q96GE5 643 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 STACQ99469 402 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 SFXN3Q9BWM7 321 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 EBPLQ9BY08 206 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 UGT2B28Q9BY64 529 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 NCOR1P1Q9H4R4 102 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 SDHAF3Q9NRP4 125 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 DDX18Q9NVP1 670 aaKnown RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 TAS2R1Q9NYW7 299 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 MTCH1Q9NZJ7 389 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 DKKL1Q9UK85 242 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 RAB26Q9ULW5 256 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CAB39Q9Y376 341 aaPredicted RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 GOLT1BQ9Y3E0 138 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 POLR3HQ9Y535 204 aaPredicted RBP2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 TIMM22Q9Y584 194 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 DNAJC15Q9Y5T4 150 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 ARID1AO14497 2285 aa2.59□□□□□ -1.99
CDC42BPA-212ENST00000478573 CREBBPQ92793 2442 aa2.59□□□□□ -2
CDC42BPA-212ENST00000478573 TEX15Q9BXT5 2789 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms