RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 LINC00596Q86U02 117 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 STPG2Q8N412 459 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 C9orf62Q8N4C0 152 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 TMEM86BQ8N661 226 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 NANOGP1Q8N7R0 232 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 ZNF485Q8NCK3 441 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 SLC24A4Q8NFF2 622 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 OR10AC1Q8NH08 325 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 ZNF431Q8TF32 576 aaPredicted RBP6.55□□□□□ -1.36
DDX39B-218ENST00000478365 FAM216AQ8WUB2 273 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 PHYHIPQ92561 330 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 GHSRQ92847 366 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 SLAMF9Q96A28 289 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 FYTTD1Q96QD9 318 aaKnown RBP6.55□□□□□ -1.36
DDX39B-218ENST00000478365 PFDN5Q99471 154 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 GPER1Q99527 375 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 PPIL3Q9H2H8 161 aaKnown RBP6.55□□□□□ -1.36
DDX39B-218ENST00000478365 PRDM13Q9H4Q3 707 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 HEXA-AS1Q9H8Q6 139 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 EXOSC4Q9NPD3 245 aaKnown RBP6.55□□□□□ -1.36
DDX39B-218ENST00000478365 ISYNA1Q9NPH2 558 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 NIT2Q9NQR4 276 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 IL36GQ9NZH8 169 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 MTCH1Q9NZJ7 389 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 OR14J1Q9UGF5 321 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 FOXJ3Q9UPW0 622 aa6.55□□□□□ -1.36
DDX39B-218ENST00000478365 DSCAML1Q8TD84 2053 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 FBN1P35555 2871 aaKnown RBP6.54□□□□□ -1.36
DDX39B-218ENST00000478365 IGHV1-69DA0A0B4J2H0 117 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 RPS10-NUDT3A0A1W2PQS6 291 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 hADV38S2A0JD32 116 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 HSBP1L1C9JCN9 74 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 PTGES3LE9PB15 166 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 MGST3O14880 152 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 ORC5O43913 435 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 RAB3DO95716 219 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 IGHV1-69P01742 117 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 MBP02144 154 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 CSN2P05814 226 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 CELP19835 753 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 PRTN3P24158 256 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 C21orf33P30042 268 aaPredicted RBP6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SOX2P48431 317 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 KCNJ3P48549 501 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 GP2P55259 537 aaKnown RBP6.54□□□□□ -1.36
DDX39B-218ENST00000478365 ERVFRD-1P60508 538 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 RPL15P61313 204 aaKnown RBP6.54□□□□□ -1.36
DDX39B-218ENST00000478365 RRAS2P62070 204 aaPredicted RBP6.54□□□□□ -1.36
DDX39B-218ENST00000478365 ARF6P62330 175 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SLC35A2P78381 396 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 COL10A1Q03692 680 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 DOC2BQ14184 412 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 IL13RA2Q14627 380 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SPHARQ15513 63 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 TIMM50Q3ZCQ8 353 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 MIDNQ504T8 468 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 NHLRC3Q5JS37 347 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 KLF17Q5JT82 389 aaPredicted RBP6.54□□□□□ -1.36
DDX39B-218ENST00000478365 PLET1Q6UQ28 207 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 C16orf54Q6UWD8 224 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 NRARPQ7Z6K4 114 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 CCDC190Q86UF4 302 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 FAM185AQ8N0U4 392 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 CD177Q8N6Q3 437 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 ZNRF1Q8ND25 227 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 OR51A2Q8NGJ7 313 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SSMEM1Q8WWF3 244 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SLC25A28Q96A46 364 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SEH1LQ96EE3 360 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 MRPS24Q96EL2 167 aaKnown RBP6.54□□□□□ -1.36
DDX39B-218ENST00000478365 PGLYRP3Q96LB9 341 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 ZNF488Q96MN9 340 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 TBX15Q96SF7 602 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SLC6A7Q99884 636 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SLITRK2Q9H156 845 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 METTL9Q9H1A3 318 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 DUSP21Q9H596 190 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SDHAF2Q9NX18 166 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 CLEC2DQ9UHP7 191 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 MGAT4AQ9UM21 535 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 SF3B6Q9Y3B4 125 aaKnown RBP6.54□□□□□ -1.36
DDX39B-218ENST00000478365 POMT1Q9Y6A1 747 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 LINC00312Q9Y6C7 94 aa6.54□□□□□ -1.36
DDX39B-218ENST00000478365 TRBV5-7A0A0A0MS05 114 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 BTBD17A6NE02 478 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 DNASE2O00115 360 aaPredicted RBP6.53□□□□□ -1.36
DDX39B-218ENST00000478365 ZNF737O75373 536 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 CSTBP04080 98 aaKnown RBP6.53□□□□□ -1.36
DDX39B-218ENST00000478365 IGHV4-38-2P0DP08 117 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 BCL3P20749 454 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 GABRR1P24046 479 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 PAX6P26367 422 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 ZNF93P35789 620 aaPredicted RBP6.53□□□□□ -1.36
DDX39B-218ENST00000478365 GPX4P36969 197 aaPredicted RBP6.53□□□□□ -1.36
DDX39B-218ENST00000478365 RBMXP38159 391 aaKnown RBP6.53□□□□□ -1.36
DDX39B-218ENST00000478365 PTGFRP43088 359 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 UBE2E1P51965 193 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 ZP1P60852 638 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 RAB5BP61020 215 aa6.53□□□□□ -1.36
DDX39B-218ENST00000478365 HOXA4Q00056 320 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms