RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 GBX2P52951 348 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-208ENST00000478111 SLC35B1P78383 322 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 TGIF2LXQ8IUE1 241 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 ZNF695Q8IW36 515 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 LINC00311Q8N616 119 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 ST6GALNAC6Q969X2 333 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 CPNE2Q96FN4 548 aaPredicted RBP13.13□□□□□ -0.31
TRIM13-208ENST00000478111 FAM192AQ9GZU8 254 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 IL36GQ9NZH8 169 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 ST3GAL6Q9Y274 331 aa13.13□□□□□ -0.31
TRIM13-208ENST00000478111 CCRL2O00421 344 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 GEMIN2O14893 280 aaKnown RBP13.12□□□□□ -0.31
TRIM13-208ENST00000478111 MAGEB3O15480 346 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 GAPDHP04406 335 aaKnown RBP13.12□□□□□ -0.31
TRIM13-208ENST00000478111 GZMHP20718 246 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 GPR12P47775 334 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 RBM11P57052 281 aaKnown RBP13.12□□□□□ -0.31
TRIM13-208ENST00000478111 MOB3BQ86TA1 216 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 FOXRED2Q8IWF2 684 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 IZUMO1Q8IYV9 350 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 Q8N9W7 124 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 TMEM104Q8NE00 496 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 OR52M1Q8NGK5 317 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 UBALD1Q8TB05 177 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 APH1BQ8WW43 257 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 RBMXL1Q96E39 390 aaKnown RBP13.12□□□□□ -0.31
TRIM13-208ENST00000478111 Q96MT0 163 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 WWC2-AS2Q96NR7 200 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 SLC29A1Q99808 456 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 ABCG5Q9H222 651 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 DCLRE1BQ9H816 532 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 FAM118AQ9NWS6 357 aa13.12□□□□□ -0.31
TRIM13-208ENST00000478111 DYNC2H1Q8NCM8 4307 aaKnown RBP13.11□□□□□ -0.31
TRIM13-208ENST00000478111 MPZL2O60487 215 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 OR7C1O76099 320 aaPredicted RBP13.11□□□□□ -0.31
TRIM13-208ENST00000478111 RPLP1P05386 114 aaKnown RBP13.11□□□□□ -0.31
TRIM13-208ENST00000478111 PNLIPRP3Q17RR3 467 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 KLHL22Q53GT1 634 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 TEX38Q6PEX7 206 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 LCNL1Q6ZST4 164 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 RNF152Q8N8N0 203 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 C8orf31Q8N9H6 132 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 OR2T10Q8NGZ9 312 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 OR52N1Q8NH53 320 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 GPR148Q8TDV2 347 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 ARL11Q969Q4 196 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 TMEM106AQ96A25 262 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 ORAI1Q96D31 301 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 FGF20Q9NP95 211 aaPredicted RBP13.11□□□□□ -0.31
TRIM13-208ENST00000478111 LIN7CQ9NUP9 197 aaKnown RBP13.11□□□□□ -0.31
TRIM13-208ENST00000478111 ING4Q9UNL4 249 aa13.11□□□□□ -0.31
TRIM13-208ENST00000478111 SIRT4Q9Y6E7 314 aaPredicted RBP13.11□□□□□ -0.31
TRIM13-208ENST00000478111 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 A0A1W2PP11 408 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 TMEM30CPA0ZSE6 113 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 NCBP2LA6PVI3 153 aaKnown RBP13.1□□□□□ -0.31
TRIM13-208ENST00000478111 ZNF736B4DX44 427 aaPredicted RBP13.1□□□□□ -0.31
TRIM13-208ENST00000478111 CCL24O00175 119 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 AP4M1O00189 453 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 MT-ND4P03905 459 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 DGCR2P98153 550 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 RPL22L1Q6P5R6 122 aaKnown RBP13.1□□□□□ -0.31
TRIM13-208ENST00000478111 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 CCDC107Q8WV48 283 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 RTN4IP1Q8WWV3 396 aaPredicted RBP13.1□□□□□ -0.31
TRIM13-208ENST00000478111 TFAP2CQ92754 450 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 METTL9Q9H1A3 318 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 TMEM138Q9NPI0 162 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 GFOD1Q9NXC2 390 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 RPL36Q9Y3U8 105 aaKnown RBP13.1□□□□□ -0.31
TRIM13-208ENST00000478111 LSM4Q9Y4Z0 139 aaKnown RBP13.1□□□□□ -0.31
TRIM13-208ENST00000478111 SORL1Q92673 2214 aa13.1□□□□□ -0.31
TRIM13-208ENST00000478111 IGHV3-43A0A0B4J1X8 118 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 SDCBPO00560 298 aaPredicted RBP13.09□□□□□ -0.31
TRIM13-208ENST00000478111 SLC31A2O15432 143 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 ORC5O43913 435 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 CD2P06729 351 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 IGHV3-43DP0DP04 118 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 CD1BP29016 333 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 ZNF93P35789 620 aaPredicted RBP13.09□□□□□ -0.31
TRIM13-208ENST00000478111 VHLP40337 213 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 CDX1P47902 265 aaPredicted RBP13.09□□□□□ -0.31
TRIM13-208ENST00000478111 ETV1P50549 477 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 ZNF134P52741 427 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 CFHR3Q02985 330 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 SMN1Q16637 294 aaKnown RBP13.09□□□□□ -0.31
TRIM13-208ENST00000478111 DEFB136Q30KP8 78 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 CCDC58Q4VC31 144 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 ZFP1Q6P2D0 407 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 ZNF497Q6ZNH5 498 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 ZNF439Q8NDP4 499 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 S1PR3Q99500 378 aa13.09□□□□□ -0.31
TRIM13-208ENST00000478111 OGG1O15527 345 aa13.08□□□□□ -0.32
TRIM13-208ENST00000478111 WBP4O75554 376 aaKnown RBP13.08□□□□□ -0.32
TRIM13-208ENST00000478111 IGFBP3P17936 291 aaPredicted RBP13.08□□□□□ -0.32
TRIM13-208ENST00000478111 SERPINA2P20848 420 aa13.08□□□□□ -0.32
TRIM13-208ENST00000478111 LUMP51884 338 aaPredicted RBP13.08□□□□□ -0.32
TRIM13-208ENST00000478111 FOXE3Q13461 319 aa13.08□□□□□ -0.32
TRIM13-208ENST00000478111 GPR50Q13585 617 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms