RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MASP2O00187 686 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 TOR1AO14656 332 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ABCD4O14678 606 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 GEMIN2O14893 280 aaKnown RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 GPR137BO60478 399 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 MRPL33O75394 65 aaKnown RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 SNAPINO95295 136 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 IGKV1D-12P01611 117 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 PATE4P0C8F1 98 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 CTRB1P17538 263 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 FUT3P21217 361 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 DUSP1P28562 367 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 FCGR2CP31995 323 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 OPRM1P35372 400 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 PIGPP57054 158 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ARF1P84077 181 aaKnown RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 FOXO1Q12778 655 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 IL13RA2Q14627 380 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF169Q14929 603 aaPredicted RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 MST1LQ2TV78 715 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 CR1LQ2VPA4 569 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 PABPC1L2AQ5JQF8 200 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 TSPO2Q5TGU0 170 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 GPR157Q5UAW9 335 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ABHD17BQ5VST6 288 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 TMEM268Q5VZI3 342 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 RPL7L1Q6DKI1 246 aaKnown RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 HIST2H2BCQ6DN03 193 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 CTRB2Q6GPI1 263 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ATRAIDQ6UW56 229 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 FAM180AQ6UWF9 173 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 COLCA1Q6ZS62 124 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 RAB11FIP2Q7L804 512 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 DPPA2Q7Z7J5 298 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 LGI3Q8N145 548 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 FBXL14Q8N1E6 418 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 BHLHE23Q8NDY6 225 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 OR2M7Q8NG81 312 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 FGFBP3Q8TAT2 258 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 RTN4IP1Q8WWV3 396 aaPredicted RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 PSMF1Q92530 271 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 TOMM40LQ969M1 308 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 MRPL24Q96A35 216 aaKnown RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 APOBEC3DQ96AK3 386 aaPredicted RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 MOB3AQ96BX8 217 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF845Q96IR2 970 aaPredicted RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 THOC3Q96J01 351 aaKnown RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 CYYR1Q96J86 154 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 C18orf12Q96KH6 178 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 WWC2-AS2Q96NR7 200 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 MICU1Q9BPX6 476 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 AIFM2Q9BRQ8 373 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 GPR87Q9BY21 358 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 SEC11CQ9BY50 192 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 SPRY4Q9C004 299 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 OPA3Q9H6K4 179 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF442Q9H7R0 627 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 ZNF703Q9H7S9 590 aaPredicted RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 TAF9BQ9HBM6 251 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 TREM1Q9NP99 234 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 OR2S2Q9NQN1 319 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 PARP11Q9NR21 331 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 DEPPQ9NTK1 212 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 FBXL17Q9UF56 701 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 NDRG3Q9UGV2 375 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 PURGQ9UJV8 347 aaKnown RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 TMED3Q9Y3Q3 217 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 LSM5Q9Y4Y9 91 aaKnown RBP4.23□□□□□ -1.73
SF3B6-202ENST00000478050 CENPEQ02224 2701 aa4.23□□□□□ -1.73
SF3B6-202ENST00000478050 MGAQ8IWI9 3026 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 SHANK1Q9Y566 2161 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 BORCS7-ASMTA0A0B4J1R7 106 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 PIGBOS1A0A0B4J2F0 54 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 DUXBA0A1W2PPF3 345 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 PQLC2LA1A4F0 135 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 KCNAB3O43448 404 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 MED6O75586 246 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 NEURL1O76050 574 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 DIRAS3O95661 229 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 ACTL6AO96019 429 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 GLAP06280 429 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 CTXN2P0C2S0 81 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 OR5AC1P0C628 307 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 AADACP22760 399 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 IL32P24001 234 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 ARR3P36575 388 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 P2RY1P47900 373 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 LHX2P50458 406 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 CAV2P51636 162 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 RRADP55042 308 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 F2RL1P55085 397 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 UCNP55089 124 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 CLDN18P56856 261 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 FXYD4P59646 89 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 FGF12P61328 243 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 RND3P61587 244 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 FLI1Q01543 452 aaPredicted RBP4.22□□□□□ -1.73
SF3B6-202ENST00000478050 PRDX4Q13162 271 aa4.22□□□□□ -1.73
SF3B6-202ENST00000478050 RNPS1Q15287 305 aaKnown RBP4.22□□□□□ -1.73
SF3B6-202ENST00000478050 HMGN3Q15651 99 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms