RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SLC33A1O00400 549 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 RHBDL1O75783 438 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 SCGB1D2O95969 90 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 APOC3P02656 99 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 BTN1A1Q13410 526 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 FOXRED2Q8IWF2 684 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 BATF2Q8N1L9 274 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 SVBPQ8N300 66 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 OR10J5Q8NHC4 309 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 SECTM1Q8WVN6 248 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 ERGIC1Q969X5 290 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 ADAT1Q9BUB4 502 aaKnown RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 FAM212BQ9NTI7 297 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 RTTNQ86VV8 2226 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF891A8MT65 544 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 ABCD4O14678 606 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 IGLV1-44P01699 117 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 CELA3BP08861 270 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 RCC1P18754 421 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 KITLGP21583 273 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 LMO1P25800 156 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 IGFL3Q6UXB1 125 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 FAM219AQ8IW50 185 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 WDR31Q8NA23 367 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 SLC25A40Q8TBP6 338 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 NKX6-2Q9C056 277 aaPredicted RBP10.36□□□□□ -0.75
PTPRF-212ENST00000477970 OR2J1Q9GZK6 312 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 TOLLIPQ9H0E2 274 aa10.36□□□□□ -0.75
PTPRF-212ENST00000477970 DNASE2O00115 360 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 PGLYRP1O75594 196 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 PVALBP20472 110 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 TMPRSS3P57727 454 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 ID3Q02535 119 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 HMGN3Q15651 99 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 MED12LQ86YW9 2145 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF488Q96MN9 340 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 MS4A7Q9GZW8 240 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 STRAPQ9Y3F4 350 aaKnown RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 NKX2-6A6NCS4 301 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 ZNHIT1O43257 154 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 DANCRP0C864 163 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 F2RP25116 425 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 LPAR6P43657 344 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 MSMO1Q15800 293 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 ACSF3Q4G176 576 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 CCL28Q9NRJ3 127 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 PITX3O75364 302 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 MED6O75586 246 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 OR2H2O95918 312 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 CD5P06127 495 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 ADCYAP1P18509 176 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 WT1P19544 449 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 NKX2-1P43699 371 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 BAXQ07812 192 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 FIP1L1Q6UN15 594 aaKnown RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 OR8G5Q8NG78 346 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 PRR7Q8TB68 274 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 PLPPR1Q8TBJ4 325 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 TSNAXQ99598 290 aaKnown RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 WFDC1Q9HC57 220 aa10.35□□□□□ -0.75
PTPRF-212ENST00000477970 LYRM2Q9NU23 88 aaPredicted RBP10.35□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF407Q9C0G0 2248 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-212ENST00000477970 SH2D1BO14796 132 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 IDH3GP51553 393 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-212ENST00000477970 PSG7Q13046 419 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 ZNF154Q13106 437 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 MEX3BQ6ZN04 569 aaKnown RBP10.34□□□□□ -0.75
PTPRF-212ENST00000477970 C9orf106Q8NAJ2 232 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 OR1J1Q8NGS3 322 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 SLC25A31Q9H0C2 315 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 SEBOXQ9HB31 216 aaPredicted RBP10.34□□□□□ -0.75
PTPRF-212ENST00000477970 UQCC1Q9NVA1 299 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 KNTC1P50748 2209 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 HS3ST1O14792 307 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 FBXO24O75426 580 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 CD200P41217 278 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 EWSR1Q01844 656 aaKnown RBP eCLIP10.34□□□□□ -0.75
PTPRF-212ENST00000477970 PAX5Q02548 391 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 OR8G1Q15617 311 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 C3orf36Q3SXR2 165 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 SPATA46Q5T0L3 261 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 MBNL2Q5VZF2 373 aaKnown RBP10.34□□□□□ -0.75
PTPRF-212ENST00000477970 ATRAIDQ6UW56 229 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 OR2C3Q8N628 320 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 OR10V1Q8NGI7 309 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 RDH5Q92781 318 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 LSM10Q969L4 123 aaKnown RBP10.34□□□□□ -0.75
PTPRF-212ENST00000477970 PLEKHF2Q9H8W4 249 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 USP24Q9UPU5 2620 aa10.34□□□□□ -0.75
PTPRF-212ENST00000477970 A0A1B0GU03 582 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 MBD3L4A6NDZ8 208 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-212ENST00000477970 MBD3L3A6NE82 208 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-212ENST00000477970 MBD3L5A6NJ08 208 aaPredicted RBP10.33□□□□□ -0.76
PTPRF-212ENST00000477970 LYZL6O75951 148 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 CGAP01215 116 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 HOXC12P31275 282 aa10.33□□□□□ -0.76
PTPRF-212ENST00000477970 SRSF6Q13247 344 aaKnown RBP10.33□□□□□ -0.76
PTPRF-212ENST00000477970 P2RY6Q15077 328 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms