RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 SELENOIQ9C0D9 397 aa11.05□□□□□ -0.64
HDAC7-222ENST00000477937 TPRKBQ9Y3C4 175 aa11.05□□□□□ -0.64
HDAC7-222ENST00000477937 H0YHG0 523 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 KCNAB3O43448 404 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 ORC5O43913 435 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 CRTAPO75718 401 aaPredicted RBP11.04□□□□□ -0.64
HDAC7-222ENST00000477937 MT-ND4P03905 459 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 FAM106CPP0CH98 169 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 MGMTP16455 207 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 GNG10P50151 68 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 MADCAM1Q13477 382 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 MED22Q15528 200 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 ZNF497Q6ZNH5 498 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 LYPD6Q86Y78 171 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 OR10X1Q8NGY0 326 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 ARL11Q969Q4 196 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 TMED9Q9BVK6 235 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 WNT10AQ9GZT5 417 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 VCX3BQ9H321 246 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 BANF2Q9H503 90 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 GHRLQ9UBU3 117 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 VWFP04275 2813 aa11.04□□□□□ -0.64
HDAC7-222ENST00000477937 PLXNB1O43157 2135 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A10PA6NDY2 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A18PA6NE21 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A16PA6NEW6 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A20PA6NIJ5 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A7PA6NKC0 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A12PA8MX19 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A5PA8MXJ8 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A23PA8MXZ1 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 C15orf65H3BRN8 121 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 M0QZK8 103 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 AIPO00170 330 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A15PP0C7V4 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A13PP0C7W8 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A14PP0C7W9 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A24PP0C7X0 464 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 CD28P10747 220 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 MYF6P23409 242 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 RAB7AP51149 207 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 SLC35A2P78381 396 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 EMX1Q04741 257 aaPredicted RBP11.03□□□□□ -0.64
HDAC7-222ENST00000477937 GPR50Q13585 617 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 RAB12Q6IQ22 244 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 THNSL2Q86YJ6 484 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 OR52M1Q8NGK5 317 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 OCSTAMPQ9BR26 566 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 RAB9BQ9NP90 201 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 ETAA1Q9NY74 926 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 RCC2Q9P258 522 aaKnown RBP11.03□□□□□ -0.64
HDAC7-222ENST00000477937 TRAPPC2LQ9UL33 140 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 LSM2Q9Y333 95 aaKnown RBP11.03□□□□□ -0.64
HDAC7-222ENST00000477937 PEX16Q9Y5Y5 336 aa11.03□□□□□ -0.64
HDAC7-222ENST00000477937 FAM90A9PA6NNJ1 464 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 SDCBPO00560 298 aaPredicted RBP11.02□□□□□ -0.65
HDAC7-222ENST00000477937 SPINT2O43291 252 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 GLAP06280 429 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 LPLP06858 475 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 SRMP19623 302 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 FUT3P21217 361 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 INSL4Q14641 139 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 TMEM95Q3KNT9 176 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 ABCA11PQ4W5N1 156 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 FAM27D1Q5T7N8 215 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 SYT6Q5T7P8 510 aaPredicted RBP11.02□□□□□ -0.65
HDAC7-222ENST00000477937 GLT8D1Q68CQ7 371 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 CEACAM19Q7Z692 300 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 CENPVQ7Z7K6 275 aaPredicted RBP11.02□□□□□ -0.65
HDAC7-222ENST00000477937 OR8H3Q8N146 312 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 LYG1Q8N1E2 194 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 TMEM104Q8NE00 496 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 WIPF2Q8TF74 440 aaPredicted RBP11.02□□□□□ -0.65
HDAC7-222ENST00000477937 PHYHIPQ92561 330 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 SGCDQ92629 289 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 Q96M66 194 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 ANKRD60Q9BZ19 345 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 CST11Q9H112 138 aa11.02□□□□□ -0.65
HDAC7-222ENST00000477937 A0A1W2PPE3 182 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 RGS10O43665 173 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 CA11O75493 328 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 OPN1MWP04001 364 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 GAPDHP04406 335 aaKnown RBP11.01□□□□□ -0.65
HDAC7-222ENST00000477937 SNRNP70P08621 437 aaKnown RBP11.01□□□□□ -0.65
HDAC7-222ENST00000477937 UBBP0CG47 229 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 OPN1MW2P0DN77 364 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 OPN1MW3P0DN78 364 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 GP2P55259 537 aaKnown RBP11.01□□□□□ -0.65
HDAC7-222ENST00000477937 LOXL3P58215 753 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 DIAPH2-AS1Q14236 149 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 HES1Q14469 280 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 IRF3Q14653 427 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 NSUN5P1Q3KNT7 163 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 FBLN7Q53RD9 439 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 RBM48Q5RL73 367 aaKnown RBP11.01□□□□□ -0.65
HDAC7-222ENST00000477937 C6orf183Q5T699 404 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 TRAT1Q6PIZ9 186 aa11.01□□□□□ -0.65
HDAC7-222ENST00000477937 LRRTM1Q86UE6 522 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms