RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 AADACP22760 399 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 CHRNB4P30926 498 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 SNRPD2P62316 118 aaKnown RBP6.7□□□□□ -1.34
VMA21-203ENST00000477649 EIF5AP63241 154 aaKnown RBP6.7□□□□□ -1.34
VMA21-203ENST00000477649 BAMBIQ13145 260 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TMEM187Q14656 261 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 SMCO1Q147U7 214 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TESK1Q15569 626 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 SLC9A3R2Q15599 337 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TMEM30BQ3MIR4 351 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 PRSS54Q6PEW0 395 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TMUB2Q71RG4 321 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 LDLRAD3Q86YD5 345 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 H1FOOQ8IZA3 346 aaPredicted RBP6.7□□□□□ -1.34
VMA21-203ENST00000477649 KCNRGQ8N5I3 272 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TCTEX1D1Q8N7M0 179 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 RELL2Q8NC24 303 aaPredicted RBP6.7□□□□□ -1.34
VMA21-203ENST00000477649 ZNF680Q8NEM1 530 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 OR2Z1Q8NG97 314 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 OR5D13Q8NGL4 314 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 OR11L1Q8NGX0 322 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 Q8TCH9 128 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TOMM40LQ969M1 308 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 GALMQ96C23 342 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 PHYHIPLQ96FC7 376 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 WDR89Q96FK6 387 aaPredicted RBP6.7□□□□□ -1.34
VMA21-203ENST00000477649 MEGF10Q96KG7 1140 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 LURAP1Q96LR2 239 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 ZNF488Q96MN9 340 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 SLC5A7Q9GZV3 580 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 ESRP2Q9H6T0 727 aaKnown RBP6.7□□□□□ -1.34
VMA21-203ENST00000477649 HEXA-AS1Q9H8Q6 139 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 FAM212BQ9NTI7 297 aaPredicted RBP6.7□□□□□ -1.34
VMA21-203ENST00000477649 COQ3Q9NZJ6 369 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 ZNF581Q9P0T4 197 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TNFSF18Q9UNG2 199 aa6.7□□□□□ -1.34
VMA21-203ENST00000477649 TRAV14DV4A0A0A6YYC5 116 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 C3orf85A0A1B0GTC6 90 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 C13orf42A0A1B0GVH6 325 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 ATP6V1G2-DDX39BF2Z307 99 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 H0YL77 283 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.69□□□□□ -1.34
VMA21-203ENST00000477649 SIRPB1O00241 398 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 TAAR5O14804 337 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 MGST3O14880 152 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 BET1O15155 118 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 CDS2O95674 445 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 SCTP09683 121 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 IRF2P14316 349 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 CXCL2P19875 107 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 PI3P19957 117 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 GZMHP20718 246 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 DUSP1P28562 367 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 GNRHRP30968 328 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 CCKARP32238 428 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 LUMP51884 338 aaPredicted RBP6.69□□□□□ -1.34
VMA21-203ENST00000477649 FXYD4P59646 89 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 UBA52P62987 128 aaKnown RBP6.69□□□□□ -1.34
VMA21-203ENST00000477649 IL15RAQ13261 267 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 PDCD1Q15116 288 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 ANKRD55Q3KP44 614 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 IGSF11Q5DX21 431 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 PCSK4Q6UW60 755 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 BVESQ8NE79 360 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 LILRB4Q8NHJ6 448 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 LRRC29Q8WV35 223 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 DYRK2Q92630 601 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 RNASE6Q93091 150 aaKnown RBP6.69□□□□□ -1.34
VMA21-203ENST00000477649 SNX22Q96L94 193 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 TMEM56Q96MV1 263 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 EGLN1Q9GZT9 426 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 ARL6Q9H0F7 186 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 TMEM222Q9H0R3 208 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 FAM234AQ9H0X4 552 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 LIME1Q9H400 295 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 MSL2Q9HCI7 577 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 IL36RNQ9UBH0 155 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 NDRG3Q9UGV2 375 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 TMEM56-RWDD3S4R434 201 aa6.69□□□□□ -1.34
VMA21-203ENST00000477649 SMG1Q96Q15 3661 aaKnown RBP6.69□□□□□ -1.34
VMA21-203ENST00000477649 MYO7BQ6PIF6 2116 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 TRGV8A0A0C4DH27 118 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 ZSCAN5BA6NJL1 495 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 LRRC30A6NM36 301 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 H0Y980 276 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 HSPB6O14558 160 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 HSPA12AO43301 675 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 BCL2L11O43521 198 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 TSC22D2O75157 780 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 ATG12O94817 140 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 LHBP01229 141 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 HEXAP06865 529 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 SLC25A6P12236 298 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 MUC1P15941 1255 aaPredicted RBP6.68□□□□□ -1.34
VMA21-203ENST00000477649 UCP1P25874 307 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 PRDX2P32119 198 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 HTD2P86397 168 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 TNFAIP6P98066 277 aaPredicted RBP6.68□□□□□ -1.34
VMA21-203ENST00000477649 HERPUD1Q15011 391 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 IGFBP7Q16270 282 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms