RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SERPINA7P05543 415 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 TACSTD2P09758 323 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 CDKN1AP38936 164 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 MTCP1P56278 107 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 CLDN15P56746 228 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 NANOS3P60323 173 aaKnown RBP10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 ARG2P78540 354 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 COL9A2Q14055 689 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 WDR25Q64LD2 544 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 C16orf82Q7Z2V1 217 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 DTWD2Q8NBA8 298 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 ST6GALNAC3Q8NDV1 305 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 OR2Y1Q8NGV0 311 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 TSEN15Q8WW01 171 aaKnown RBP10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 HOXB13Q92826 284 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 TMEM230Q96A57 120 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 AGMATQ9BSE5 352 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 DUSP23Q9BVJ7 150 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 MOB1AQ9H8S9 216 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 PLEKHJ1Q9NW61 149 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 CACNA1EQ15878 2313 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 CACNA1IQ9P0X4 2223 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 TRAV8-7A0A075B6U6 113 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 OR11H12B2RN74 326 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 G3V3Y1 287 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 TAX1BP3O14907 124 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 TSPAN13O95857 204 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 S100GP29377 79 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 ANKRD55Q3KP44 614 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 WDR74Q6RFH5 385 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 WDR5BQ86VZ2 330 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 OR11H1Q8NG94 326 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 OR51L1Q8NGJ5 315 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 OR11H2Q8NH07 326 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 DOK4Q8TEW6 326 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 LMF2Q9BU23 707 aaKnown RBP10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 TTTY10Q9BZA0 68 aa10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 MRM2Q9UI43 246 aaKnown RBP10.97□□□□□ -0.65
RTFDC1-207ENST00000477573 TMEM150CB9EJG8 249 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 ZNF154Q13106 437 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 ZNF266Q14584 549 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 IAH1Q2TAA2 248 aaPredicted RBP10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 WDR82Q6UXN9 313 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 GDF7Q7Z4P5 450 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 SFRP2Q96HF1 295 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 C5orf66Q9H5L9 145 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 C12orf49Q9H741 205 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 SERTAD3Q9UJW9 196 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 PILRBQ9UKJ0 227 aa10.96□□□□□ -0.65
RTFDC1-207ENST00000477573 ZNF716A6NP11 495 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 DIRC3C9JPN6 131 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 KLRC4-KLRK1H3BQV0 150 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 CD55P08174 381 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 IGLC1P0CG04 106 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 CCL2P13500 99 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 RPL15P61313 204 aaKnown RBP10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 SUPT4H1P63272 117 aaKnown RBP10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 HIST3H3Q16695 136 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 AMMECR1LQ6DCA0 310 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 KCNIP4Q6PIL6 250 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 CYP2G1PQ6ZSU1 146 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 SHISA5Q8N114 240 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 C5orf17Q8NAS9 161 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 MAFAQ8NHW3 353 aaPredicted RBP10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 TMEM255BQ8WV15 326 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 PSMF1Q92530 271 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 SARAFQ96BY9 339 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 MANBALQ9NQG1 85 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 C1orf123Q9NWV4 160 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 MRPS28Q9Y2Q9 187 aaKnown RBP10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 PXMP4Q9Y6I8 212 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 PCDH15Q96QU1 1955 aa10.96□□□□□ -0.66
RTFDC1-207ENST00000477573 UNC13CQ8NB66 2214 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 SERINC4A6NH21 518 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 NUPR1O60356 82 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 GDF9O60383 454 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 CDS2O95674 445 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 HRH1P35367 487 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 CYB561P49447 251 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 EMDP50402 254 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 MRPL2Q5T653 305 aaKnown RBP10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 PMS2CLQ68D20 193 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 FAM180AQ6UWF9 173 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 PLXDC2Q6UX71 529 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 DGAT2L6Q6ZPD8 337 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 DEFB125Q8N687 156 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 OR5A2Q8NGI9 324 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 OR2G3Q8NGZ4 309 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 VSTM2LQ96N03 204 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 TSPAN32Q96QS1 320 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 RFNGQ9Y644 331 aa10.95□□□□□ -0.66
RTFDC1-207ENST00000477573 TGFBR3LH3BV60 316 aa10.94□□□□□ -0.66
RTFDC1-207ENST00000477573 LAMTOR5O43504 91 aa10.94□□□□□ -0.66
RTFDC1-207ENST00000477573 C1QTNF9P0C862 333 aa10.94□□□□□ -0.66
RTFDC1-207ENST00000477573 SOX2P48431 317 aa10.94□□□□□ -0.66
RTFDC1-207ENST00000477573 LCN6P62502 163 aa10.94□□□□□ -0.66
RTFDC1-207ENST00000477573 CSNK2A1P68400 391 aaPredicted RBP10.94□□□□□ -0.66
RTFDC1-207ENST00000477573 FUT7Q11130 342 aa10.94□□□□□ -0.66
RTFDC1-207ENST00000477573 MSMO1Q15800 293 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms