RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 MRPS24Q96EL2 167 aaKnown RBP12.54□□□□□ -0.4
CLDN11-204ENST00000477531 PGLYRP3Q96LB9 341 aa12.54□□□□□ -0.4
CLDN11-204ENST00000477531 OR14A2Q96R54 314 aa12.54□□□□□ -0.4
CLDN11-204ENST00000477531 MRPS28Q9Y2Q9 187 aaKnown RBP12.54□□□□□ -0.4
CLDN11-204ENST00000477531 TSSC4Q9Y5U2 329 aaPredicted RBP12.54□□□□□ -0.4
CLDN11-204ENST00000477531 TRAV39A0A0B4J263 110 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 A0A1W2PPK0 400 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 MCRIP1C9JLW8 97 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 SNRNP70P08621 437 aaKnown RBP12.53□□□□□ -0.4
CLDN11-204ENST00000477531 TMEM11P17152 192 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 CELP19835 753 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 FSTP19883 344 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 CD33P20138 364 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 MAPK3P27361 379 aaPredicted RBP12.53□□□□□ -0.4
CLDN11-204ENST00000477531 RPS11P62280 158 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLDN11-204ENST00000477531 UTF1Q5T230 341 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 AWAT2Q6E213 333 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 GLIPR1L1Q6UWM5 242 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 REC114Q7Z4M0 266 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 DRAM1Q8N682 238 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 BPIFB6Q8NFQ5 453 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 OR52M1Q8NGK5 317 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 MUL1Q969V5 352 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 PSORS1C1Q9UIG5 152 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 ERGIC3Q9Y282 383 aa12.53□□□□□ -0.4
CLDN11-204ENST00000477531 TRAV8-7A0A075B6U6 113 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 TRBV5-7A0A0A0MS05 114 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 A0A1W2PP11 408 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A18PA6NE21 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A16PA6NEW6 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A20PA6NIJ5 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A9PA6NNJ1 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 ADARB2-AS1A8MUL3 147 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A12PA8MX19 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A5PA8MXJ8 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 AIPO00170 330 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 SDCBPO00560 298 aaPredicted RBP12.52□□□□□ -0.41
CLDN11-204ENST00000477531 ORC5O43913 435 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 PF4P02776 101 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 MAS1P04201 325 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 GAPDHP04406 335 aaKnown RBP12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A15PP0C7V4 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A13PP0C7W8 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A14PP0C7W9 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A24PP0C7X0 464 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 IL3RAP26951 378 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 WNT4P56705 351 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 DOC2BQ14184 412 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 KHDC1LQ5JSQ8 128 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 KPRPQ5T749 579 aaPredicted RBP12.52□□□□□ -0.41
CLDN11-204ENST00000477531 AHSA2Q719I0 299 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 ZNF485Q8NCK3 441 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 PLCXD1Q9NUJ7 323 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 ZNF581Q9P0T4 197 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 TRAPPC2LQ9UL33 140 aa12.52□□□□□ -0.41
CLDN11-204ENST00000477531 RRP15Q9Y3B9 282 aaKnown RBP12.52□□□□□ -0.41
CLDN11-204ENST00000477531 A0A1W2PPE3 182 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 A0A1W2PPI3 338 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 MAGEA13PA6NCF6 341 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 SH2D7A6NKC9 451 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-204ENST00000477531 CCRL2O00421 344 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 SPINT2O43291 252 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 MT-ND4P03905 459 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 AMY1AP04745 511 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 AMY2AP04746 511 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 CD1AP06126 327 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 GNAO1P09471 354 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 HNF4GQ14541 408 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 OGFRL1Q5TC84 451 aaPredicted RBP12.51□□□□□ -0.41
CLDN11-204ENST00000477531 ZNF497Q6ZNH5 498 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 MOB3BQ86TA1 216 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 NKAIN3Q8N8D7 197 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 SGCDQ92629 289 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 MYDGFQ969H8 173 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 DERL3Q96Q80 235 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 GFOD1Q9NXC2 390 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 ETAA1Q9NY74 926 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 PEX16Q9Y5Y5 336 aa12.51□□□□□ -0.41
CLDN11-204ENST00000477531 PSMB11A5LHX3 300 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A10PA6NDY2 464 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A7PA6NKC0 464 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 FAM90A23PA8MXZ1 464 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 HSD17B6O14756 317 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 FGF16O43320 207 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 CRTAPO75718 401 aaPredicted RBP12.5□□□□□ -0.41
CLDN11-204ENST00000477531 IGKV1D-33P01593 117 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 IGKV1-33P01594 117 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 ZNF816Q0VGE8 651 aaPredicted RBP12.5□□□□□ -0.41
CLDN11-204ENST00000477531 SYT6Q5T7P8 510 aaPredicted RBP12.5□□□□□ -0.41
CLDN11-204ENST00000477531 RAB12Q6IQ22 244 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 TRAT1Q6PIZ9 186 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 NANOGP1Q8N7R0 232 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 UQCC2Q9BRT2 126 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 SELENOIQ9C0D9 397 aa12.5□□□□□ -0.41
CLDN11-204ENST00000477531 RCC2Q9P258 522 aaKnown RBP12.5□□□□□ -0.41
CLDN11-204ENST00000477531 IGHV1-3A0A0C4DH29 117 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms