RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SERTAD4Q9NUC0 356 aa9.52□□□□□ -0.88
COL27A1-204ENST00000477421 CDH23Q9H251 3354 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 OR5B21A6NL26 309 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 TRDCB7Z8K6 153 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 M0R1X1 148 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 VDAC1P21796 283 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF345Q14585 488 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 LFNGQ8NES3 379 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 MED9Q9NWA0 146 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 GAB2Q9UQC2 676 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 MFSD2BA6NFX1 497 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 FCGR3BO75015 233 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 PSG2P11465 335 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 TAS2R30P59541 319 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 DHODHQ02127 395 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 HMGN3Q15651 99 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 CLPPQ16740 277 aaPredicted RBP9.52□□□□□ -0.89
COL27A1-204ENST00000477421 ATRAIDQ6UW56 229 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 IL34Q6ZMJ4 242 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 FADS6Q8N9I5 356 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 LRRC29Q8WV35 223 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 NIT2Q9NQR4 276 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 MPC1Q9Y5U8 109 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 LIPGQ9Y5X9 500 aa9.52□□□□□ -0.89
COL27A1-204ENST00000477421 TMEM30CPA0ZSE6 113 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 PINLYPA6NC86 204 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 RNF222A6NCQ9 220 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 MUC1P15941 1255 aaPredicted RBP9.51□□□□□ -0.89
COL27A1-204ENST00000477421 KITLGP21583 273 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 DVL1P1P54792 670 aaPredicted RBP9.51□□□□□ -0.89
COL27A1-204ENST00000477421 EWSR1Q01844 656 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL27A1-204ENST00000477421 SMIM21Q3B7S5 101 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 C10orf128Q5T292 105 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 ASPHD2Q6ICH7 369 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 RBMS3Q6XE24 437 aaKnown RBP9.51□□□□□ -0.89
COL27A1-204ENST00000477421 C5orf24Q7Z6I8 188 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 WDFY1Q8IWB7 410 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 OR5A2Q8NGI9 324 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 HIPK2Q9H2X6 1198 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 RCC2Q9P258 522 aaKnown RBP9.51□□□□□ -0.89
COL27A1-204ENST00000477421 WSB1Q9Y6I7 421 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 CACNA1AO00555 2505 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 SHOXO15266 292 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF735P0CB33 412 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 CASP6P55212 293 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 TMEM211Q6ICI0 200 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 UQCC3Q6UW78 93 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF581Q9P0T4 197 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 STRAPQ9Y3F4 350 aaKnown RBP9.51□□□□□ -0.89
COL27A1-204ENST00000477421 NPTNQ9Y639 398 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 GNG10P50151 68 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 BIVMQ86UB2 503 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 CPEB3Q8NE35 698 aaKnown RBP9.51□□□□□ -0.89
COL27A1-204ENST00000477421 OR4F5Q8NH21 305 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 OR4F4Q96R69 305 aa9.51□□□□□ -0.89
COL27A1-204ENST00000477421 RPL36A-HNRNPH2H7BZ11 118 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 AQP7O14520 342 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 MELTFP08582 738 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 NQO2P16083 231 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 PTGDSP41222 190 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 FLI1Q01543 452 aaPredicted RBP9.5□□□□□ -0.89
COL27A1-204ENST00000477421 IL13RA2Q14627 380 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 RIPPLY2Q5TAB7 128 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 DECR2Q9NUI1 292 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 SLC2A8Q9NY64 477 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 PCNX3Q9H6A9 2034 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF705GA8MUZ8 300 aaPredicted RBP9.5□□□□□ -0.89
COL27A1-204ENST00000477421 PRRG2O14669 202 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 PMELP40967 661 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 PSMB3P49720 205 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 SNRPEP62304 92 aaKnown RBP9.5□□□□□ -0.89
COL27A1-204ENST00000477421 CEACAM21Q3KPI0 293 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 TMEM54Q969K7 222 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 SMIM7Q9BQ49 75 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 RSRP1Q9BUV0 290 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 C2orf16Q68DN1 1984 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 BPTFQ12830 3046 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 COL4A4P53420 1690 aaPredicted RBP9.5□□□□□ -0.89
COL27A1-204ENST00000477421 OR5H1A6NKK0 313 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 NUDT19A8MXV4 375 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 J3QT63 122 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 SYNGR3O43761 229 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 OR8U8P0C7N1 319 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 SP9P0CG40 484 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 ATP6V0CP27449 155 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 MPV17LQ2QL34 196 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 ZIC4Q8N9L1 334 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 SLC25A22Q9H936 323 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 ATP23Q9Y6H3 246 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 KIAA1671Q9BY89 1806 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 DOCK11Q5JSL3 2073 aa9.5□□□□□ -0.89
COL27A1-204ENST00000477421 A0A1W2PPE3 182 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 PPP1CCP36873 323 aaKnown RBP9.49□□□□□ -0.89
COL27A1-204ENST00000477421 ERVS71-1P61550 626 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 AWAT1Q58HT5 328 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 C12orf57Q99622 126 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 RTBDNQ9BSG5 229 aaPredicted RBP9.49□□□□□ -0.89
COL27A1-204ENST00000477421 hCG_1809904A0A1W2PP81 198 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms