RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 METTL21EPA6NDL7 271 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 C15orf65H3BRN8 121 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 NAPSAO96009 420 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 IGHV1-8P0DP01 117 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 ZNF182P17025 639 aaPredicted RBP12.96□□□□□ -0.33
COPS3-207ENST00000477299 CDK2P24941 298 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 PAX6P26367 422 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 CHRFAM7AQ494W8 412 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 PIP4P2Q8N4L2 257 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 OR1L1Q8NH94 360 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 NANPQ8TBE9 248 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 C17orf50Q8WW18 174 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 LEAP2Q969E1 77 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 BCL7BQ9BQE9 202 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 SUCNR1Q9BXA5 334 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 NCOR1P1Q9H4R4 102 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 METTL8Q9H825 291 aaKnown RBP12.96□□□□□ -0.33
COPS3-207ENST00000477299 CALYQ9NYX4 217 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 LPAR3Q9UBY5 353 aa12.96□□□□□ -0.33
COPS3-207ENST00000477299 TRAV18A0A075B6X5 111 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 KBTBD11-OT1A0A1B0GTJ5 212 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 MDFIC2A0A1B0GVS7 189 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 ZNF729A6NN14 1252 aaPredicted RBP12.95□□□□□ -0.34
COPS3-207ENST00000477299 C12orf77C9JDV5 145 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 CTDSP2O14595 271 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 HIST1H1DP16402 221 aaKnown RBP12.95□□□□□ -0.34
COPS3-207ENST00000477299 ELK1P19419 428 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 ZNF260Q3ZCT1 412 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 LDLRAD2Q5SZI1 272 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 ZNF565Q8N9K5 539 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 SETD6Q8TBK2 473 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 MAFIPQ8WZ33 124 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 ARL11Q969Q4 196 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 DCUN1D5Q9BTE7 237 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 MIXL1Q9H2W2 232 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 UNKLQ9H9P5 680 aaKnown RBP12.95□□□□□ -0.34
COPS3-207ENST00000477299 TAS2R3Q9NYW6 316 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 OR6C3Q9NZP0 311 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 ZNRD1Q9P1U0 126 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 RSL24D1Q9UHA3 163 aaKnown RBP12.95□□□□□ -0.34
COPS3-207ENST00000477299 ZNF230Q9UIE0 474 aaPredicted RBP12.95□□□□□ -0.34
COPS3-207ENST00000477299 CDC42EP3Q9UKI2 254 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 NUP50Q9UKX7 468 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 TRAPPC2LQ9UL33 140 aa12.95□□□□□ -0.34
COPS3-207ENST00000477299 IGHV3-43A0A0B4J1X8 118 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 IGHV1-69DA0A0B4J2H0 117 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 TMEM235A6NFC5 223 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 NPIPB11E5RHQ5 1161 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 SSX5O60225 188 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 NOL3O60936 208 aaKnown RBP12.94□□□□□ -0.34
COPS3-207ENST00000477299 CLPXO76031 633 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 IGHV1-69P01742 117 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 IGHV3-43DP0DP04 118 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 SRD5A1P18405 259 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 RANBP1P43487 201 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 SCAND1P57086 179 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 UBE2NLQ5JXB2 153 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 ZNF880Q6PDB4 577 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 HEPN1Q6WQI6 88 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 KCTD12Q96CX2 325 aaKnown RBP12.94□□□□□ -0.34
COPS3-207ENST00000477299 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 KIRREL1Q96J84 757 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 ZNF48Q96MX3 618 aaPredicted RBP12.94□□□□□ -0.34
COPS3-207ENST00000477299 CMSS1Q9BQ75 279 aaKnown RBP12.94□□□□□ -0.34
COPS3-207ENST00000477299 ABCG5Q9H222 651 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 TAF9BQ9HBM6 251 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 ZNF286AQ9HBT8 521 aa12.94□□□□□ -0.34
COPS3-207ENST00000477299 IGKV1D-8A0A087WSZ0 117 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 A0A1W2PPH5 198 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 HBZP02008 142 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 HNF1AP20823 631 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 EPHA1P21709 976 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 NFYBP25208 207 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 SRSF2Q01130 221 aaKnown RBP12.93□□□□□ -0.34
COPS3-207ENST00000477299 PRR18Q8N4B5 295 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 NUDCD2Q8WVJ2 157 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 GCDHQ92947 438 aaPredicted RBP12.93□□□□□ -0.34
COPS3-207ENST00000477299 SLC6A7Q99884 636 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 SLIRPQ9GZT3 109 aaKnown RBP12.93□□□□□ -0.34
COPS3-207ENST00000477299 TMEM133Q9H2Q1 129 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 LINC00574Q9H8X3 128 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 CHMP1AQ9HD42 196 aaPredicted RBP12.93□□□□□ -0.34
COPS3-207ENST00000477299 MBNL3Q9NUK0 354 aaKnown RBP12.93□□□□□ -0.34
COPS3-207ENST00000477299 IDI2-AS1Q9NZ38 188 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 SESN1Q9Y6P5 492 aa12.93□□□□□ -0.34
COPS3-207ENST00000477299 A0A1W2PPE3 182 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 H3BUI4 141 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 TMEM127O75204 238 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 CA11O75493 328 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 CD3GP09693 182 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 LOXL3P58215 753 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 GUCA2AQ02747 115 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 ARFRP1Q13795 201 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 GPR157Q5UAW9 335 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 LHFPL4Q7Z7J7 247 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 OR52L2PQ8NGH6 319 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 ACOT12Q8WYK0 555 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 S100A16Q96FQ6 103 aaKnown RBP12.92□□□□□ -0.34
COPS3-207ENST00000477299 GAL3ST2Q9H3Q3 398 aa12.92□□□□□ -0.34
COPS3-207ENST00000477299 Q9N2K0 584 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms