RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 DDIT4LQ96D03 193 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 RBMXL1Q96E39 390 aaKnown RBP3.59□□□□□ -1.84
CD55-208ENST00000476590 LIN37Q96GY3 246 aaPredicted RBP3.59□□□□□ -1.84
CD55-208ENST00000476590 AP1S3Q96PC3 154 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 RCHY1Q96PM5 261 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 ANAPC13Q9BS18 74 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 CST11Q9H112 138 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 OR51I1Q9H343 314 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 ZDHHC11Q9H8X9 412 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 SYNPO2LQ9H987 977 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 LYRM4Q9HD34 91 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 PXMP2Q9NR77 195 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 KCNIP1Q9NZI2 227 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 NUDT4Q9NZJ9 180 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 RALYQ9UKM9 306 aaKnown RBP3.59□□□□□ -1.84
CD55-208ENST00000476590 VDAC3Q9Y277 283 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 VSIG4Q9Y279 399 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 V9GY05 133 aa3.59□□□□□ -1.84
CD55-208ENST00000476590 PLXNA3P51805 1871 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 DCDC2BA2VCK2 349 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 MYADML2A6NDP7 307 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 FAM90A8PA6NJQ4 464 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 SLC22A20A6NK97 555 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 FAM90A27PA6NNH2 459 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 ZNF736B4DX44 427 aaPredicted RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 FFAR1O14842 300 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 TAPBPO15533 448 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 ZNF253O75346 499 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 RCBTB2O95199 551 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 SFT2D2O95562 160 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 CGAP01215 116 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 IFNA1P01562 189 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 TTRP02766 147 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 AMY1AP04745 511 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 CD1AP06126 327 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 SERPINE2P07093 398 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 ADH4P08319 380 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 FAM90A13PP0C7W8 464 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 FAM90A24PP0C7X0 464 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 SRP14P37108 136 aaKnown RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 APOBEC1P41238 236 aaKnown RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 P2RY1P47900 373 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 RRADP55042 308 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 LIM2P55344 173 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 PAX9P55771 341 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 KRTDAPP60985 99 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 YPEL3P61236 119 aaPredicted RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 LCN2P80188 198 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 RPL24P83731 157 aaKnown RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 TIAL1Q01085 375 aaKnown RBP eCLIP3.58□□□□□ -1.84
CD55-208ENST00000476590 DUSP2Q05923 314 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 MPV17L2Q567V2 206 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 Q6ZSR6 202 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 BHLHA9Q7RTU4 235 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 C16orf82Q7Z2V1 217 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 CENPVQ7Z7K6 275 aaPredicted RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 CLDN19Q8N6F1 224 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 OR2AJ1Q8NGZ0 328 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 OR4A5Q8NH83 315 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 GRAMD2BQ96HH9 432 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 C2orf50Q96LR7 162 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 TIMP4Q99727 224 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 NUDT22Q9BRQ3 303 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 LMF2Q9BU23 707 aaKnown RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 C19orf24Q9BVV8 132 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 SAMD10Q9BYL1 202 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 SMIM3Q9BZL3 60 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 PATZ1Q9HBE1 687 aaKnown RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 HINT3Q9NQE9 182 aaKnown RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 ANKRD10Q9NXR5 420 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 JKAMPQ9P055 326 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 FBLN5Q9UBX5 448 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 CRLS1Q9UJA2 301 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 PLAGL1Q9UM63 463 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 B3GALT5Q9Y2C3 310 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 WASHC3Q9Y3C0 194 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 CKAP5Q14008 2032 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 HEATR5AQ86XA9 2040 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 A0A087WX48 190 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 TEX48A0A1B0GUV7 120 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 A0A1W2PPK0 400 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 C1orf226A1L170 272 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 SMIM9A6NGZ8 99 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 KIR2DS3K7RE56 304 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 DEGS1O15121 323 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 MLNRO43193 412 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 ERI3O43414 337 aaKnown RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 GPR137BO60478 399 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 FOXH1O75593 365 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 TMEM50AO95807 157 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 HBE1P02100 147 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 REG1AP05451 166 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 PGCP20142 388 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 PRPH2P23942 346 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 OPRM1P35372 400 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 CFHR2P36980 270 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 SLC6A12P48065 614 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 RPL15P61313 204 aaKnown RBP3.58□□□□□ -1.84
CD55-208ENST00000476590 LTBQ06643 244 aa3.58□□□□□ -1.84
CD55-208ENST00000476590 FUT7Q11130 342 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms