RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CABLES2Q9BTV7 478 aa12.98□□□□□ -0.33
RPUSD3-215ENST00000475470 CNTNAP3Q9BZ76 1288 aa12.98□□□□□ -0.33
RPUSD3-215ENST00000475470 CCL28Q9NRJ3 127 aa12.98□□□□□ -0.33
RPUSD3-215ENST00000475470 COQ3Q9NZJ6 369 aa12.98□□□□□ -0.33
RPUSD3-215ENST00000475470 Q9UFV3 132 aa12.98□□□□□ -0.33
RPUSD3-215ENST00000475470 SH3BGRL2Q9UJC5 107 aa12.98□□□□□ -0.33
RPUSD3-215ENST00000475470 CUL9Q8IWT3 2517 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 GLRXP35754 106 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 SRPXP78539 464 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 AANATQ16613 207 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 VHLLQ6RSH7 139 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 MRGPRGQ86SM5 289 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 LDLRAD3Q86YD5 345 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 CMTM1Q8IZ96 169 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 SNRNP40Q96DI7 357 aaKnown RBP12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 UBE2J1Q9Y385 318 aaPredicted RBP12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 OR2W1Q9Y3N9 320 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 A0A1B0GWJ7 208 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 NMBP08949 121 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 FAM87AP0C7U9 286 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 MSMPQ1L6U9 139 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 H1FOOQ8IZA3 346 aaPredicted RBP12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 DNAJB11Q9UBS4 358 aa12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 ERRFI1Q9UJM3 462 aaPredicted RBP12.97□□□□□ -0.33
RPUSD3-215ENST00000475470 DMXL2Q8TDJ6 3036 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 PSPNO60542 156 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 SCGB1D2O95969 90 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 IGHV3-13P01766 116 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 RRASP10301 218 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 LMO1P25800 156 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 KLF3P57682 345 aaPredicted RBP12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 TMPRSS3P57727 454 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 HOXA4Q00056 320 aaPredicted RBP12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 SMIM21Q3B7S5 101 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 TMEM268Q5VZI3 342 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 TMEM222Q9H0R3 208 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 WIPI2Q9Y4P8 454 aa12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 LSM5Q9Y4Y9 91 aaKnown RBP12.96□□□□□ -0.33
RPUSD3-215ENST00000475470 MSGN1A6NI15 193 aa12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 S100GP29377 79 aa12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 NKX6-1P78426 367 aaPredicted RBP12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 LHFPL5Q8TAF8 219 aa12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 LRRC29Q8WV35 223 aa12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 AQP10Q96PS8 301 aa12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 ASF1BQ9NVP2 202 aa12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 OR1A1Q9P1Q5 309 aa12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 TMED3Q9Y3Q3 217 aa12.96□□□□□ -0.34
RPUSD3-215ENST00000475470 C1QTNF9BB2RNN3 333 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 ATP6V1G2-DDX39BF2Z307 99 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 HSPA12AO43301 675 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 PRR30Q53SZ7 412 aaPredicted RBP12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 ZNF695Q8IW36 515 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 PDZD9Q8IXQ8 264 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 SLC35G3Q8N808 338 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 PHYHIPLQ96FC7 376 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 GPHA2Q96T91 129 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 ZC4H2Q9NQZ6 224 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 MBNL3Q9NUK0 354 aaKnown RBP12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 KCNIP1Q9NZI2 227 aa12.95□□□□□ -0.34
RPUSD3-215ENST00000475470 TMEM30CPA0ZSE6 113 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 NPIPB11E5RHQ5 1161 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 DEDDO75618 318 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 PTBP3O95758 552 aaKnown RBP12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 CD200P41217 278 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 C22orf34Q6ZV56 151 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 RELL2Q8NC24 303 aaPredicted RBP12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 CXorf58Q96LI9 332 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 SLC25A32Q9H2D1 315 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 TAF9BQ9HBM6 251 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 ELOVL5Q9NYP7 299 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 ZNF835Q9Y2P0 537 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 ZGRF1Q86YA3 2104 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 C16orf97H3BN30 126 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 TNFSF12O43508 249 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 RPS23P62266 143 aaKnown RBP12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 OR10V1Q8NGI7 309 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 UBALD1Q8TB05 177 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 PRR7Q8TB68 274 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 TMEM171Q8WVE6 324 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
RPUSD3-215ENST00000475470 PGLYRP1O75594 196 aaPredicted RBP12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 MBPP02686 304 aaPredicted RBP12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 SELENOVP59797 346 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 HMGN3Q15651 99 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 GALNT11Q8NCW6 608 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 RBM7Q9Y580 266 aaKnown RBP12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 TMEM56-RWDD3S4R434 201 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 ATMQ13315 3056 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 RP1L1Q8IWN7 2480 aaPredicted RBP12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 K7EPK0 472 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 IFNL4K9M1U5 179 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 TFF1P04155 84 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 TPT1P13693 172 aaKnown RBP12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 CD40P25942 277 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 CCKARP32238 428 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 UCNP55089 124 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 RBPJQ06330 500 aa12.93□□□□□ -0.34
RPUSD3-215ENST00000475470 AESQ08117 197 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms