RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 HEPN1Q6WQI6 88 aa10.66□□□□□ -0.7
RNF220-211ENST00000474956 TMEM182Q6ZP80 229 aaPredicted RBP10.66□□□□□ -0.7
RNF220-211ENST00000474956 OR52M1Q8NGK5 317 aa10.66□□□□□ -0.7
RNF220-211ENST00000474956 EDARADDQ8WWZ3 215 aa10.66□□□□□ -0.7
RNF220-211ENST00000474956 SPSB1Q96BD6 273 aa10.66□□□□□ -0.7
RNF220-211ENST00000474956 APH1AQ96BI3 265 aa10.66□□□□□ -0.7
RNF220-211ENST00000474956 MSI2Q96DH6 328 aaKnown RBP10.66□□□□□ -0.7
RNF220-211ENST00000474956 UNKLQ9H9P5 680 aaKnown RBP10.66□□□□□ -0.7
RNF220-211ENST00000474956 HAAOP46952 286 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 CNN3Q15417 329 aaKnown RBP10.65□□□□□ -0.7
RNF220-211ENST00000474956 SLC22A25Q6T423 547 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 OSR2Q8N2R0 312 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 RCL1Q9Y2P8 373 aaKnown RBP10.65□□□□□ -0.7
RNF220-211ENST00000474956 TMED3Q9Y3Q3 217 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 PUS1Q9Y606 427 aaKnown RBP eCLIP10.65□□□□□ -0.7
RNF220-211ENST00000474956 WRBO00258 174 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 IL18BPO95998 194 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 FBP1P09467 338 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 WNT5AP41221 380 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 CCL11P51671 97 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 ARG2P78540 354 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 ZNF100Q8IYN0 542 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 C17orf78Q8N4C9 275 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 TMEM45BQ96B21 275 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 YPEL4Q96NS1 127 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 TOLLIPQ9H0E2 274 aa10.65□□□□□ -0.7
RNF220-211ENST00000474956 INTS1Q8N201 2190 aaKnown RBP10.65□□□□□ -0.7
RNF220-211ENST00000474956 GATCO43716 136 aaKnown RBP10.64□□□□□ -0.71
RNF220-211ENST00000474956 SYNGR1O43759 233 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 ERVS71-1P61550 626 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 PRDX4Q13162 271 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 ZNF266Q14584 549 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 NCMAPQ5T1S8 102 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 OR5L1Q8NGL2 311 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 ZNF816-ZNF321PA0A0X1KG74 233 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 UCP3P55916 312 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 PCBD1P61457 104 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 CCDC71LQ8N9Z2 235 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 OR8G5Q8NG78 346 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 A0A1B0GV50 99 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 HOXA5P20719 270 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 RPS10P46783 165 aaKnown RBP10.64□□□□□ -0.71
RNF220-211ENST00000474956 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.71
RNF220-211ENST00000474956 KIAA0141Q14154 515 aaPredicted RBP10.64□□□□□ -0.71
RNF220-211ENST00000474956 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 LHFPL2Q6ZUX7 228 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 BOD1Q96IK1 185 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 LOXL4Q96JB6 756 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 GGACTQ9BVM4 153 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 ABI3Q9P2A4 366 aa10.64□□□□□ -0.71
RNF220-211ENST00000474956 MED19A0JLT2 244 aaPredicted RBP10.63□□□□□ -0.71
RNF220-211ENST00000474956 BTBD17A6NE02 478 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 RBFOX3A6NFN3 312 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 CLN3Q13286 438 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 SLC10A1Q14973 349 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 ZNF766Q5HY98 468 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 OR2C3Q8N628 320 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 SUMF1Q8NBK3 374 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 FDCSPQ8NFU4 85 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 OR4D5Q8NGN0 318 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 MUCL1Q96DR8 90 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 RARRES2Q99969 163 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 REPIN1Q9BWE0 567 aaKnown RBP10.63□□□□□ -0.71
RNF220-211ENST00000474956 FAM86C1Q9NVL1 165 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 MTCH1Q9NZJ7 389 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 DMRT1Q9Y5R6 373 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 TRAV39A0A0B4J263 110 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 PHF1O43189 567 aaPredicted RBP10.63□□□□□ -0.71
RNF220-211ENST00000474956 RBM11P57052 281 aaKnown RBP10.63□□□□□ -0.71
RNF220-211ENST00000474956 OR2G3Q8NGZ4 309 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 MOB3AQ96BX8 217 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 WDYHV1Q96HA8 205 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 BCL2L14Q9BZR8 327 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 ZNF442Q9H7R0 627 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 ZNF286AQ9HBT8 521 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 SLC7A11Q9UPY5 501 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 FUT6P51993 359 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 CACNA1DQ01668 2161 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 SPSB4Q96A44 273 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 POM121L2Q96KW2 1035 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 PRDM14Q9GZV8 571 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 BCO1Q9HAY6 547 aa10.63□□□□□ -0.71
RNF220-211ENST00000474956 ZNF732B4DXR9 585 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 GPR37O15354 613 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 RHBDL1O75783 438 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 CDS2O95674 445 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 CDX1P47902 265 aaPredicted RBP10.62□□□□□ -0.71
RNF220-211ENST00000474956 ALKBH6Q3KRA9 238 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 OR2T2Q6IF00 324 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 ASCL4Q6XD76 172 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 MRPL21Q7Z2W9 205 aaKnown RBP10.62□□□□□ -0.71
RNF220-211ENST00000474956 MCEMP1Q8IX19 187 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 SLC35G3Q8N808 338 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 ZFP62Q8NB50 900 aaPredicted RBP10.62□□□□□ -0.71
RNF220-211ENST00000474956 UBALD1Q8TB05 177 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 FTH1P19P0C7X4 201 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 ATP6V0CP27449 155 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 SOX8P57073 446 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 HERV-K104P61576 105 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 SRPXP78539 464 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms