RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 SATL1Q86VE3 508 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 DRAM1Q8N682 238 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 CHST4Q8NCG5 386 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 PXT1Q8NFP0 134 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 OR4F17Q8NGA8 305 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 OR9G1Q8NH87 305 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 OR5AK2Q8NH90 309 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 ZNF596Q8TC21 504 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 MRAPQ8TCY5 172 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 CAPSLQ8WWF8 208 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 TMEM106AQ96A25 262 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 PGLYRP3Q96LB9 341 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 NOL4LQ96MY1 436 aaPredicted RBP4.69□□□□□ -1.66
CPSF7-210ENST00000474684 RBM14Q96PK6 669 aaKnown RBP4.69□□□□□ -1.66
CPSF7-210ENST00000474684 OR4F4Q96R69 305 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 GPER1Q99527 375 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 C9orf16Q9BUW7 83 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 FAM118AQ9NWS6 357 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 CLEC2DQ9UHP7 191 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 LINC00527Q9UJ94 153 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 RAB26Q9ULW5 256 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 PSG11Q9UQ72 335 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 NBEAL2Q6ZNJ1 2754 aa4.69□□□□□ -1.66
CPSF7-210ENST00000474684 RYR2Q92736 4967 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 TRBV5-5A0A0J9YX44 114 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 PNMA8CA0A1B0GUJ8 204 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 WI2-2373I1.2A0A1W2PRP0 233 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 TCRBV4S1A1TA0A5B7 111 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A18PA6NE21 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A16PA6NEW6 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A20PA6NIJ5 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 LINC01548A6NM66 108 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A9PA6NNJ1 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A12PA8MX19 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A5PA8MXJ8 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 LEUTXA8MZ59 168 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 NPIPB11E5RHQ5 1161 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 C15orf65H3BRN8 121 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 J3QR06 171 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 TOR1AO14656 332 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 HSD17B6O14756 317 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 GEMIN2O14893 280 aaKnown RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 CASQ2O14958 399 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 DENRO43583 198 aaKnown RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 OR7C1O76099 320 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 HTR3BO95264 441 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FADS2O95864 444 aaKnown RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 MPIG6BO95866 241 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 IGKV1D-33P01593 117 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 IGKV1-33P01594 117 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A15PP0C7V4 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A13PP0C7W8 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A14PP0C7W9 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FAM90A24PP0C7X0 464 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 SERPINA2P20848 420 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 HOXD3P31249 432 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 BRS3P32247 399 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 GBX2P52951 348 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 RBM11P57052 281 aaKnown RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 ARPC4P59998 168 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 KRTAP10-11P60412 298 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 RPS11P62280 158 aaKnown RBP eCLIP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 THOC7Q6I9Y2 204 aaKnown RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 OR52W1Q6IF63 320 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 LAIR2Q6ISS4 152 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 ASCL4Q6XD76 172 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 ZBTB49Q6ZSB9 765 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 LCNL1Q6ZST4 164 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 C16orf82Q7Z2V1 217 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 ZNF329Q86UD4 541 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 RTN4RL2Q86UN3 420 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 SERPINA12Q8IW75 414 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 C5orf56Q8N8D9 126 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 LINC00482Q8N8I6 264 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 SUMF2Q8NBJ7 301 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 ZNF485Q8NCK3 441 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 Q8NFD4 153 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 OR4D6Q8NGJ1 314 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 BORCS5Q969J3 196 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 RPEQ96AT9 228 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 SMIM19Q96E16 107 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 DUX3Q96PT4 197 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 DPCDQ9BVM2 203 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 KCNK15Q9H427 330 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 FGF20Q9NP95 211 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 C8orf4Q9NR00 106 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 INPP5EQ9NRR6 644 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 MRPS18AQ9NVS2 196 aaKnown RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 NECAP2Q9NVZ3 263 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 SMPD3Q9NY59 655 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 IDI2-AS1Q9NZ38 188 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 OR6C3Q9NZP0 311 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 NKX1-2Q9UD57 310 aaPredicted RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 RSL24D1Q9UHA3 163 aaKnown RBP4.68□□□□□ -1.66
CPSF7-210ENST00000474684 GLS2Q9UI32 602 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 MOB4Q9Y3A3 225 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 PCDHGB5Q9Y5G0 923 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 HSPE1-MOB4S4R3N1 261 aa4.68□□□□□ -1.66
CPSF7-210ENST00000474684 STARD9Q9P2P6 4700 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms