RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 LANCL1O43813 399 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 LPLP06858 475 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 HEXAP06865 529 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 FCGR3AP08637 254 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 IGHV4-31P0DP07 118 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 NAT1P18440 290 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 GZMHP20718 246 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 DTYMKP23919 212 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 DGCR2P98153 550 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 SRSF7Q16629 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
COL8A1-206ENST00000474648 C17orf58Q2M2W7 97 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 TMEM249Q2WGJ8 235 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 PYDC2Q56P42 97 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 Q6ZS49 121 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 TRAPPC6BQ86SZ2 158 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 HOGA1Q86XE5 327 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 LYSMD2Q8IV50 215 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 GVQW1Q8N7I0 195 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 MRGPRDQ8TDS7 321 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 MAFIPQ8WZ33 124 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 ST6GALNAC5Q9BVH7 336 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 LINC00574Q9H8X3 128 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 CHMP1AQ9HD42 196 aaPredicted RBP8.24□□□□□ -1.09
COL8A1-206ENST00000474648 OR6C3Q9NZP0 311 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 TRAPPC2LQ9UL33 140 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 UBE2J1Q9Y385 318 aaPredicted RBP8.24□□□□□ -1.09
COL8A1-206ENST00000474648 RBMX2Q9Y388 322 aaKnown RBP8.24□□□□□ -1.09
COL8A1-206ENST00000474648 LINC00312Q9Y6C7 94 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 CREBBPQ92793 2442 aa8.24□□□□□ -1.09
COL8A1-206ENST00000474648 ZANQ9Y493 2812 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 TRGV10A0A0A0MS01 117 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 PPIAL4CA0A0B4J2A2 164 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 IGHV2-70DA0A0C4DH43 119 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 KBTBD11-OT1A0A1B0GTJ5 212 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 B4DSR2 109 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 TRDCB7Z8K6 153 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 C12orf77C9JDV5 145 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 NPIPB11E5RHQ5 1161 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 ORC5O43913 435 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 PPIAL4GP0DN37 164 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 CCL3L1P16619 93 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 CBX5P45973 191 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 ERVFRD-1P60508 538 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 MRPS10P82664 201 aaKnown RBP8.23□□□□□ -1.09
COL8A1-206ENST00000474648 HMGN3Q15651 99 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 BAK1Q16611 211 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 RNASE12Q5GAN4 147 aaKnown RBP8.23□□□□□ -1.09
COL8A1-206ENST00000474648 FAM185AQ8N0U4 392 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 GDPD1Q8N9F7 314 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 ZNF565Q8N9K5 539 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 LINC01356Q8N9X3 169 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 SMIM4Q8WVI0 70 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 FCAMRQ8WWV6 532 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 S100ZQ8WXG8 99 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 SNAPC3Q92966 411 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 MSI2Q96DH6 328 aaKnown RBP8.23□□□□□ -1.09
COL8A1-206ENST00000474648 DMRTB1Q96MA1 342 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 THAP7Q9BT49 309 aaPredicted RBP8.23□□□□□ -1.09
COL8A1-206ENST00000474648 LPAR2Q9HBW0 351 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 TAS2R3Q9NYW6 316 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 KLK11Q9UBX7 282 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 LPAR3Q9UBY5 353 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 MTFP1Q9UDX5 166 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 OPN4Q9UHM6 478 aa8.23□□□□□ -1.09
COL8A1-206ENST00000474648 ZNF469Q96JG9 3925 aaPredicted RBP8.22□□□□□ -1.09
COL8A1-206ENST00000474648 FLNAP21333 2647 aaKnown RBP8.22□□□□□ -1.09
COL8A1-206ENST00000474648 IGKV1-6A0A0C4DH72 117 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 C17orf98A8MV24 154 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 RBBP9O75884 186 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 MMP23AO75900 390 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 FCER2P06734 321 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 LIPFP07098 398 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 MSMBP08118 114 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 SCTP09683 121 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 GSTT2P0CG29 244 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 GSTT2BP0CG30 244 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 ZNF728P0DKX0 622 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
COL8A1-206ENST00000474648 SSTR5P35346 364 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 GDNFP39905 211 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 PPP5CP53041 499 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 ARF6P62330 175 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 MRPS15P82914 257 aaKnown RBP8.22□□□□□ -1.09
COL8A1-206ENST00000474648 PAX8Q06710 450 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 ZNF846Q147U1 533 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 C6orf183Q5T699 404 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 FAM53AQ6NSI3 398 aaPredicted RBP8.22□□□□□ -1.09
COL8A1-206ENST00000474648 MOB1BQ7L9L4 216 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 ZNF554Q86TJ5 538 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 Q8N402 240 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 Q8N7P7 452 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 OR1L1Q8NH94 360 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 RFESDQ8TAC1 157 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 UBALD1Q8TB05 177 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 SETD6Q8TBK2 473 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 ARL11Q969Q4 196 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 COX4I2Q96KJ9 171 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 TAF9BQ9HBM6 251 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 CALYQ9NYX4 217 aa8.22□□□□□ -1.09
COL8A1-206ENST00000474648 INSIG2Q9Y5U4 225 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms