RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 SCGB2A2Q13296 93 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 BCL6BQ8N143 479 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-204ENST00000474644 PNKDQ8N490 385 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 ISOC1Q96CN7 298 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
COL1A1-204ENST00000474644 SLC6A7Q99884 636 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 MS4A7Q9GZW8 240 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-204ENST00000474644 HEXA-AS1Q9H8Q6 139 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 LINC00574Q9H8X3 128 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 AK3Q9UIJ7 227 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 TRAPPC2LQ9UL33 140 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 SPATA2Q9UM82 520 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 SOX21Q9Y651 276 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-204ENST00000474644 CEPT1Q9Y6K0 416 aa12.86□□□□□ -0.35
COL1A1-204ENST00000474644 A0A1W2PRD5 423 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 A0A1W2PRF3 423 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 A0A1W2PRM7 423 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 H3BMQ9 156 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 MFNGO00587 321 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 NAPSAO96009 420 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 HIST1H1DP16402 221 aaKnown RBP12.85□□□□□ -0.35
COL1A1-204ENST00000474644 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-204ENST00000474644 RORCP51449 518 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 UBE2E1P51965 193 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 BPIFB3P59826 476 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 OLFML2AQ68BL7 652 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 BAIAP2L2Q6UXY1 529 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 Q6ZPA2 131 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 KIRREL1Q96J84 757 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 HDHD3Q9BSH5 251 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-204ENST00000474644 SUCNR1Q9BXA5 334 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 RBM38Q9H0Z9 239 aaKnown RBP12.85□□□□□ -0.35
COL1A1-204ENST00000474644 TMEM133Q9H2Q1 129 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 C12orf4Q9NQ89 552 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 KCNK7Q9Y2U2 307 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 MXRA5Q9NR99 2828 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 ATRQ13535 2644 aa12.85□□□□□ -0.35
COL1A1-204ENST00000474644 A0A075B6Q4 140 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 C12orf77C9JDV5 145 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 NPIPB11E5RHQ5 1161 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 C15orf65H3BRN8 121 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 NPFFO15130 113 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 ORC5O43913 435 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 SCGNO76038 276 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 GNB3P16520 340 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 FPR2P25090 351 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 TUSC1Q2TAM9 212 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 UBE2NLQ5JXB2 153 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 C6orf183Q5T699 404 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 SAMD12Q8N8I0 201 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 OR13D1Q8NGV5 346 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 RFESDQ8TAC1 157 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 UBALD1Q8TB05 177 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 CHMP1AQ9HD42 196 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-204ENST00000474644 MBNL3Q9NUK0 354 aaKnown RBP12.84□□□□□ -0.35
COL1A1-204ENST00000474644 IDI2-AS1Q9NZ38 188 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 COL6A5A8TX70 2615 aa12.84□□□□□ -0.35
COL1A1-204ENST00000474644 IGHV2-26A0A0B4J1V2 119 aa12.83□□□□□ -0.36
COL1A1-204ENST00000474644 FAM172BPA6NC97 362 aa12.83□□□□□ -0.36
COL1A1-204ENST00000474644 GZMHP20718 246 aa12.83□□□□□ -0.36
COL1A1-204ENST00000474644 SAA4P35542 130 aa12.83□□□□□ -0.36
COL1A1-204ENST00000474644 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
COL1A1-204ENST00000474644 OR52W1Q6IF63 320 aa12.83□□□□□ -0.36
COL1A1-204ENST00000474644 TRAT1Q6PIZ9 186 aa12.83□□□□□ -0.36
COL1A1-204ENST00000474644 OR11H6Q8NGC7 330 aa12.83□□□□□ -0.36
COL1A1-204ENST00000474644 ARL11Q969Q4 196 aa12.83□□□□□ -0.36
COL1A1-204ENST00000474644 CMSS1Q9BQ75 279 aaKnown RBP12.83□□□□□ -0.36
COL1A1-204ENST00000474644 RIMS4Q9H426 269 aaPredicted RBP12.83□□□□□ -0.36
COL1A1-204ENST00000474644 ZMAT3Q9HA38 289 aaKnown RBP12.83□□□□□ -0.36
COL1A1-204ENST00000474644 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL1A1-204ENST00000474644 A0A087X0M5 115 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 TRBV6-6A0A0A6YYG2 114 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 A0A0U1RQK1 487 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 MDFIC2A0A1B0GVS7 189 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 A0A1B0GX30 115 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 CCDC160A6NGH7 325 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 SERPINE3A8MV23 424 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ODF3BA8MYP8 253 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF182P17025 639 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-204ENST00000474644 NFYBP25208 207 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 LTC4SQ16873 150 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 MIDNQ504T8 468 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 UTF1Q5T230 341 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF626Q68DY1 528 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF880Q6PDB4 577 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 MOB1BQ7L9L4 216 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF554Q86TJ5 538 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 OR10A7Q8NGE5 316 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 DYNC2LI1Q8TCX1 351 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ACOT12Q8WYK0 555 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 AP3S1Q92572 193 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF48Q96MX3 618 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-204ENST00000474644 CLEC7AQ9BXN2 247 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ABCG5Q9H222 651 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 OCEL1Q9H607 264 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 TAF9BQ9HBM6 251 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF286AQ9HBT8 521 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 COMMD3Q9UBI1 195 aa12.82□□□□□ -0.36
COL1A1-204ENST00000474644 CUBNO60494 3623 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms