RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 CCDC163A0A0D9SF12 145 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 B4DGG1 531 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 H7BYZ3 331 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 K7ESF4 209 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 M0R135 149 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 DUX1O43812 170 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 HRASP01112 189 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 TRGC2P03986 189 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 QDPRP09417 244 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 HLA-DOBP13765 273 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 DAOP14920 347 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF17P17021 662 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 GRNP28799 593 aaKnown RBP6.95□□□□□ -1.3
CCDC93-208ENST00000474546 APLNRP35414 380 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 MDH2P40926 338 aaKnown RBP6.95□□□□□ -1.3
CCDC93-208ENST00000474546 ERV3-1Q14264 604 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 GAMTQ14353 236 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 RNPS1Q15287 305 aaKnown RBP6.95□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 PLPPR5Q32ZL2 321 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM41BQ5BJD5 291 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 FAM27BQ5VT28 67 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 NCR3LG1Q68D85 454 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 TTLL10Q6ZVT0 673 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 LYZL2Q7Z4W2 148 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 RABEPKQ7Z6M1 372 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 CENPVQ7Z7K6 275 aaPredicted RBP6.95□□□□□ -1.3
CCDC93-208ENST00000474546 C17orf82Q86X59 251 aaPredicted RBP6.95□□□□□ -1.3
CCDC93-208ENST00000474546 SFTPA1Q8IWL2 248 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 ZFP62Q8NB50 900 aaPredicted RBP6.95□□□□□ -1.3
CCDC93-208ENST00000474546 BHLHE23Q8NDY6 225 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 Q8NFD4 153 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM170AQ8WVE7 144 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM54Q969K7 222 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF799Q96GE5 643 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 ADGRG7Q96K78 797 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 FOXN4Q96NZ1 517 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 NEU1Q99519 415 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 GPR61Q9BZJ8 451 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 DUSP15Q9H1R2 295 aaPredicted RBP6.95□□□□□ -1.3
CCDC93-208ENST00000474546 MED29Q9NX70 200 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 KLRF1Q9NZS2 232 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 B3GAT1Q9P2W7 334 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 LIPGQ9Y5X9 500 aa6.95□□□□□ -1.3
CCDC93-208ENST00000474546 FN1P02751 2386 aaKnown RBP6.95□□□□□ -1.3
CCDC93-208ENST00000474546 IGLV3-12A0A075B6K2 115 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 TRBV6-6A0A0A6YYG2 114 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 OR6C6A6NF89 314 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 IFITM10A6NMD0 228 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF727A8MUV8 499 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 H0Y8X5 98 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 RAMP1O60894 148 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 ZFAND5O76080 213 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 KBTBD11O94819 623 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 SOD3P08294 240 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 CST2P09228 141 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 SFTPCP11686 197 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 OR10J1P30954 320 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 CTHP32929 405 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 ERVFRD-1P60508 538 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 ERVFC1-1P60608 527 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 RAB11AP62491 216 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 PAFAH1B2P68402 229 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 FOXF1Q12946 379 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 ENDOGQ14249 297 aaKnown RBP6.94□□□□□ -1.3
CCDC93-208ENST00000474546 MSMO1Q15800 293 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM249Q2WGJ8 235 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 NMSQ5H8A3 153 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 TMEM42Q69YG0 159 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 RHBDD2Q6NTF9 364 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 TMPRSS7Q7RTY8 843 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 C6orf201Q7Z4U5 140 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 PPP1R3BQ86XI6 285 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 C20orf196Q8IYI0 205 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 PRR22Q8IZ63 422 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 D2HGDHQ8N465 521 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 TCTEX1D1Q8N7M0 179 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 OR5L1Q8NGL2 311 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 FAM216AQ8WUB2 273 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 FBXO17Q96EF6 278 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 DDA1Q9BW61 102 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 MRPL37Q9BZE1 423 aaKnown RBP6.94□□□□□ -1.3
CCDC93-208ENST00000474546 SH3BGRL3Q9H299 93 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 OR51B6Q9H340 312 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 OR51I2Q9H344 312 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 METTL7AQ9H8H3 244 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 KCNIP2Q9NS61 270 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 MCTS1Q9ULC4 181 aaKnown RBP6.94□□□□□ -1.3
CCDC93-208ENST00000474546 MMP17Q9ULZ9 603 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 NBEAL1Q6ZS30 2694 aa6.94□□□□□ -1.3
CCDC93-208ENST00000474546 GOLGA4Q13439 2230 aaKnown RBP6.94□□□□□ -1.3
CCDC93-208ENST00000474546 HIVEP1P15822 2718 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 F5P12259 2224 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 TRBV23-1A0A0A0MS06 115 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 TGIF2-C20orf24A0A0A6YYL0 155 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 ZNF816-ZNF321PA0A0X1KG74 233 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 A0A1W2PPC4 97 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 IGSF23A1L1A6 192 aa6.93□□□□□ -1.3
CCDC93-208ENST00000474546 MAP1LC3B2A6NCE7 125 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms