RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ARL14EPLP0DKL9 152 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 M6PRP20645 277 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 PSMA1P25786 263 aaKnown RBP1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 TNNC1P63316 161 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 PRDX1Q06830 199 aaKnown RBP1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 BAXQ07812 192 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 PAFAH1B3Q15102 231 aaKnown RBP1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 MAPK14Q16539 360 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 ACTL10Q5JWF8 245 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 FAM183BPQ6ZVS7 135 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 TCF23Q7RTU1 214 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 KRTCAP2Q8N6L1 136 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 GATD1Q8NB37 220 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 OR10P1Q8NGE3 313 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 ERMNQ8TAM6 284 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 MAL2Q969L2 176 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 GALMQ96C23 342 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 MRPS24Q96EL2 167 aaKnown RBP1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 MBOAT7Q96N66 472 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 CATSPER2Q96P56 530 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 BCL7BQ9BQE9 202 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 FAAP24Q9BTP7 215 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 TAPBPLQ9BX59 468 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 COMMD9Q9P000 198 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 CHTOPQ9Y3Y2 248 aaKnown RBP1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 ALG5Q9Y673 324 aa1.19□□□□□ -2.22
ECHDC1-213ENST00000474240 A0A1W2PQL4 384 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 IGKV2-29A2NJV5 120 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 C19orf71A6NCJ1 209 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 KNCNA6PVL3 124 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 SC5DO75845 299 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 CSTAP01040 98 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 GZMBP10144 247 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 EVI2BP34910 448 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 SPAM1P38567 509 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 ACTR1BP42025 376 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 GABARAPL2P60520 117 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 C1QTNF8P60827 252 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 RAB2AP61019 212 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 PDK2Q15119 407 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 SSX7Q7RTT5 188 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 MRPL52Q86TS9 123 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 ST13P4Q8IZP2 240 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 RNASE11Q8TAA1 199 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 CCDC124Q96CT7 223 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 NAP1L5Q96NT1 182 aaPredicted RBP1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 XKR8Q9H6D3 395 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 TXNL4BQ9NX01 149 aaKnown RBP1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 OR51B4Q9Y5P0 310 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 TNIKQ9UKE5 1360 aa1.18□□□□□ -2.22
ECHDC1-213ENST00000474240 LTBP2Q14767 1821 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 ARAP3Q8WWN8 1544 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 C17orf98A8MV24 154 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 LECT2O14960 151 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 FGF16O43320 207 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 ATP6V0CP27449 155 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 BLVRBP30043 206 aaPredicted RBP1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 LPAR6P43657 344 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 PLTPP55058 493 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 MP68P56378 58 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 RWDD2BP57060 319 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 FLOT2Q14254 428 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 PCOTHQ58A44 107 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 FAM162BQ5T6X4 162 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 FAM19A1Q7Z5A9 133 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 C10orf126Q8N4M7 172 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 ZIC4Q8N9L1 334 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 OR4X1Q8NH49 305 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 MSANTD3Q96H12 275 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 MGLLQ99685 303 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 EBPLQ9BY08 206 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 POTEKPQ9BYX7 375 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 TTTY12Q9BZ98 90 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 RMND1Q9NWS8 449 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 STMN3Q9NZ72 180 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 CCL26Q9Y258 94 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 LINC00588Q9Y4M8 146 aa1.17□□□□□ -2.22
ECHDC1-213ENST00000474240 BAHCC1Q9P281 2608 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 A0A0J9YX75 114 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 IGSF23A1L1A6 192 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 H3BRN7 92 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 UBFD1O14562 309 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 IGKV5-2P06315 115 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 MAGEA3P43357 314 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 HINT1P49773 126 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 UBE2KP61086 200 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 SLC35A2P78381 396 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 ZNF117Q03924 483 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 CD164Q04900 197 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 XRCC4Q13426 336 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 BSXQ3C1V8 233 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 TTC33Q6PID6 262 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 CLEC20AQ6ZU45 233 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 SCXQ7RTU7 201 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 MARCH3Q86UD3 253 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 SELENOHQ8IZQ5 122 aaKnown RBP1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 OR10A6Q8NH74 314 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 FAM45AQ8TCE6 357 aa1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 CCDC12Q8WUD4 166 aaPredicted RBP1.16□□□□□ -2.22
ECHDC1-213ENST00000474240 TMEM239Q8WW34 195 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms