RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 FAM90A13PP0C7W8 464 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 FAM90A14PP0C7W9 464 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 FAM90A24PP0C7X0 464 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 DCKP27707 260 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 KCNJ3P48549 501 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 RAB7AP51149 207 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 RIPK1Q13546 671 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 CCDC58Q4VC31 144 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 C18orf65Q6ZTR6 163 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 THNSL2Q86YJ6 484 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 PRR18Q8N4B5 295 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 SMIM19Q96E16 107 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 RBMXL1Q96E39 390 aaKnown RBP9.47□□□□□ -0.89
SMPD4-217ENST00000473720 CHCHD3Q9NX63 227 aaKnown RBP9.47□□□□□ -0.89
SMPD4-217ENST00000473720 BABAM2Q9NXR7 383 aa9.47□□□□□ -0.89
SMPD4-217ENST00000473720 IGHV1-3A0A0C4DH29 117 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 AIPO00170 330 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 MAS1P04201 325 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 GAPDHP04406 335 aaKnown RBP9.46□□□□□ -0.9
SMPD4-217ENST00000473720 RAB25P57735 213 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 ASCL4Q6XD76 172 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 C8orf86Q6ZUL3 223 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 SLC35E3Q7Z769 313 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 OR8H3Q8N146 312 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 STX19Q8N4C7 294 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 JAGN1Q8N5M9 183 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 KLHL30-AS1Q8NEE0 82 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 WFDC9Q8NEX5 89 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 OR51D1Q8NGF3 324 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 OR4K15Q8NH41 348 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 CHPT1Q8WUD6 406 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 GHSRQ92847 366 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 MUL1Q969V5 352 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 RCC1LQ96I51 464 aaKnown RBP9.46□□□□□ -0.9
SMPD4-217ENST00000473720 DUX3Q96PT4 197 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 NCOR1P1Q9H4R4 102 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 PAK1IP1Q9NWT1 392 aaPredicted RBP9.46□□□□□ -0.9
SMPD4-217ENST00000473720 CKLFQ9UBR5 152 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 TRAPPC2LQ9UL33 140 aa9.46□□□□□ -0.9
SMPD4-217ENST00000473720 EXOSC1Q9Y3B2 195 aaKnown RBP9.46□□□□□ -0.9
SMPD4-217ENST00000473720 TRAV8-7A0A075B6U6 113 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 IRGMA1A4Y4 181 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 LINC01548A6NM66 108 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 K7EIL1 84 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 EBAG9O00559 213 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 OGG1O15527 345 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 GTF2F2P13984 249 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 GZMHP20718 246 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 KRTAP10-11P60412 298 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 RPL23AP62750 156 aaKnown RBP9.45□□□□□ -0.9
SMPD4-217ENST00000473720 SLC35B1P78383 322 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 MED21Q13503 144 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 MPV17LQ2QL34 196 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 LINC00596Q86U02 117 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 FOXRED2Q8IWF2 684 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 Q8NFD4 153 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 OR10A7Q8NGE5 316 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 OR10V1Q8NGI7 309 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 TMEM80Q96HE8 168 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 OR14A2Q96R54 314 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 BANF2Q9H503 90 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 IL36GQ9NZH8 169 aa9.45□□□□□ -0.9
SMPD4-217ENST00000473720 DIMT1Q9UNQ2 313 aaKnown RBP9.45□□□□□ -0.9
SMPD4-217ENST00000473720 MRPS28Q9Y2Q9 187 aaKnown RBP9.45□□□□□ -0.9
SMPD4-217ENST00000473720 WI2-2373I1.2A0A1W2PRP0 233 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 MCRIP1C9JLW8 97 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 C15orf65H3BRN8 121 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 SLC31A2O15432 143 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 IGFBP3P17936 291 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-217ENST00000473720 IL3RAP26951 378 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 VHLP40337 213 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 ZNF816Q0VGE8 651 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-217ENST00000473720 Q499Y3 187 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 NHLRC3Q5JS37 347 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 SYT6Q5T7P8 510 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-217ENST00000473720 DMKNQ6E0U4 476 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-217ENST00000473720 AWAT2Q6E213 333 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 GLIPR1L1Q6UWM5 242 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 ETV3LQ6ZN32 361 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 SLC16A12Q6ZSM3 486 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 LCNL1Q6ZST4 164 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 MRPL41Q8IXM3 137 aaKnown RBP9.44□□□□□ -0.9
SMPD4-217ENST00000473720 STPG2Q8N412 459 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 LINC00482Q8N8I6 264 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 DPF1Q92782 380 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 GGHQ92820 318 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 EAF1Q96JC9 268 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-217ENST00000473720 RDH12Q96NR8 316 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 IFT22Q9H7X7 185 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 LINC00574Q9H8X3 128 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 GFOD1Q9NXC2 390 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 ETAA1Q9NY74 926 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 GNG12Q9UBI6 72 aa9.44□□□□□ -0.9
SMPD4-217ENST00000473720 TRBV5-5A0A0J9YX44 114 aa9.43□□□□□ -0.9
SMPD4-217ENST00000473720 UBE2QL1A1L167 161 aa9.43□□□□□ -0.9
SMPD4-217ENST00000473720 ZNF736B4DX44 427 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-217ENST00000473720 FGF16O43320 207 aa9.43□□□□□ -0.9
SMPD4-217ENST00000473720 ZNF780AO75290 641 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-217ENST00000473720 CRTAPO75718 401 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-217ENST00000473720 DUS4LO95620 317 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms