RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 BEND2Q8NDZ0 799 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 OR10J5Q8NHC4 309 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 GPR87Q9BY21 358 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 MRPS18CQ9Y3D5 142 aaKnown RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 RALGAPA1Q6GYQ0 2036 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 A0A087X0M5 115 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 A0A1B0GX30 115 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SLC22A20A6NK97 555 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 NPIPB11E5RHQ5 1161 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SLC31A2O15432 143 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SYNGR2O43760 224 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 CST7O76096 145 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 P04436 131 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 CXCL1P09341 107 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SRP14P37108 136 aaKnown RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 CARD18P57730 90 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 JOSD1Q15040 202 aaPredicted RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 COA6Q5JTJ3 125 aaKnown RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 C9orf152Q5JTZ5 239 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SLC25A26Q70HW3 274 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 MRPL21Q7Z2W9 205 aaKnown RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 TMEM217Q8N7C4 229 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 OR2AE1Q8NHA4 323 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 PSMF1Q92530 271 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 TMEM45BQ96B21 275 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 TMEM18Q96B42 140 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SIGLEC12Q96PQ1 595 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 C1QTNF5Q9BXJ0 243 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 ACTR3CQ9C0K3 210 aaPredicted RBP5.27□□□□□ -1.57
HERC4-209ENST00000473533 STRADBQ9C0K7 418 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 CA14Q9ULX7 337 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 OR2W1Q9Y3N9 320 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 SLCO1B1Q9Y6L6 691 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 URGCP-MRPS24S4R325 110 aa5.27□□□□□ -1.57
HERC4-209ENST00000473533 IGKV1-27A0A075B6S5 117 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 TGIF2-C20orf24A0A0A6YYL0 155 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 H7BYZ3 331 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 VENTXO95231 258 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 FABP4P15090 132 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 ERVFRD-1P60508 538 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 CCL20P78556 96 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 PHYHD1Q5SRE7 291 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 PRAMEF20Q5VT98 475 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 MRPL52Q86TS9 123 aaKnown RBP5.26□□□□□ -1.57
HERC4-209ENST00000473533 ZBTB34Q8NCN2 500 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 OR5A2Q8NGI9 324 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 TMEM171Q8WVE6 324 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 DNASE2BQ8WZ79 361 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 C2orf88Q9BSF0 95 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 CHODLQ9H9P2 273 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 GLRX2Q9NS18 164 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 SLC39A9Q9NUM3 307 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 PSENENQ9NZ42 101 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 MAP1LC3B2A6NCE7 125 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 EPOPA6NHQ4 379 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 OR5B21A6NL26 309 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 C2CD4DB7Z1M9 353 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 TNFSF11O14788 317 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 KLK2P20151 261 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 RPL19P84098 196 aaKnown RBP5.26□□□□□ -1.57
HERC4-209ENST00000473533 ZNF154Q13106 437 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 LRRC75BQ2VPJ9 315 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 CEACAM21Q3KPI0 293 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 CXorf66Q5JRM2 361 aaPredicted RBP5.26□□□□□ -1.57
HERC4-209ENST00000473533 FAM90A2PQ658T7 463 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 ZNF385CQ66K41 422 aaPredicted RBP5.26□□□□□ -1.57
HERC4-209ENST00000473533 MRPL14Q6P1L8 145 aaKnown RBP5.26□□□□□ -1.57
HERC4-209ENST00000473533 ZNF818PQ6ZRF7 136 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 ZNF573Q86YE8 665 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 TCTEX1D1Q8N7M0 179 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 ZIC4Q8N9L1 334 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 APOBEC3DQ96AK3 386 aaPredicted RBP5.26□□□□□ -1.57
HERC4-209ENST00000473533 CLDN23Q96B33 292 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 LURAP1Q96LR2 239 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 SMIM7Q9BQ49 75 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 TXNDC17Q9BRA2 123 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 GPR61Q9BZJ8 451 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 LINC00470Q9BZP3 86 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 MAP1LC3BQ9GZQ8 125 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 CDH20Q9HBT6 801 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 CRLF2Q9HC73 371 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 WDFY4Q6ZS81 3184 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 PCNX3Q9H6A9 2034 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 IGKV1-12A0A0C4DH73 117 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 ZFP92A6NM28 416 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 CEBPZOSA8MTT3 80 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 C17orf112F2Z3M2 114 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 PGLYRP1O75594 196 aaPredicted RBP5.26□□□□□ -1.57
HERC4-209ENST00000473533 KBTBD11O94819 623 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 IGKV1D-12P01611 117 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 FGF5P12034 268 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 CEACAM6P40199 344 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 PSG4Q00888 419 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 TRA2AQ13595 282 aaKnown RBP eCLIP5.26□□□□□ -1.57
HERC4-209ENST00000473533 PCOLCEQ15113 449 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 IQCJQ1A5X6 159 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 ABLIM2Q6H8Q1 611 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 P4HA3Q7Z4N8 544 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 Q8IYB0 196 aa5.26□□□□□ -1.57
HERC4-209ENST00000473533 OR1P1Q8NH06 330 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms