RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 YLPM1P49750 1951 aaKnown RBP13.91□□□□□ -0.18
CCM2-205ENST00000472223 KBTBD11-OT1A0A1B0GTJ5 212 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 J3QLI3 93 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 FCN3O75636 299 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 RBBP9O75884 186 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 FCGR3AP08637 254 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 SRSF7Q16629 238 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCM2-205ENST00000472223 OR52W1Q6IF63 320 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 C1orf122Q6ZSJ8 110 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 PRR18Q8N4B5 295 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 TEX29Q8N6K0 151 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 OR13A1Q8NGR1 328 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 GALMQ96C23 342 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 OCSTAMPQ9BR26 566 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 HDHD3Q9BSH5 251 aaPredicted RBP13.9□□□□□ -0.18
CCM2-205ENST00000472223 Q9N2K0 584 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 MMP26Q9NRE1 261 aa13.9□□□□□ -0.18
CCM2-205ENST00000472223 TRAV39A0A0B4J263 110 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 MEX3AA1L020 520 aaKnown RBP13.89□□□□□ -0.19
CCM2-205ENST00000472223 TRDCB7Z8K6 153 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 GABARAPH6UMI1 98 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 CTDSPLO15194 276 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 TOX4O94842 621 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 RBP4P02753 201 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 ZNF16P17020 682 aaPredicted RBP13.89□□□□□ -0.19
CCM2-205ENST00000472223 RCC1P18754 421 aaPredicted RBP13.89□□□□□ -0.19
CCM2-205ENST00000472223 ETV6P41212 452 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 ERVFRD-1P60508 538 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 ACTBP60709 375 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 ACTG1P63261 375 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 ZNF273Q14593 569 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 CR1LQ2VPA4 569 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 TMEM30BQ3MIR4 351 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 KIAA2026Q5HYC2 2103 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 CCDC190Q86UF4 302 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 RTN4RL2Q86UN3 420 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 OR10A7Q8NGE5 316 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 C7orf69Q9H7B7 122 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 METTL8Q9H825 291 aaKnown RBP13.89□□□□□ -0.19
CCM2-205ENST00000472223 TAF9BQ9HBM6 251 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 MBNL3Q9NUK0 354 aaKnown RBP13.89□□□□□ -0.19
CCM2-205ENST00000472223 CALYQ9NYX4 217 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 ELF5Q9UKW6 265 aaPredicted RBP13.89□□□□□ -0.19
CCM2-205ENST00000472223 AUP1Q9Y679 476 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 DSCAML1Q8TD84 2053 aa13.89□□□□□ -0.19
CCM2-205ENST00000472223 CSMD1Q96PZ7 3565 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 CD5LO43866 347 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 PTHLHP12272 177 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 CCL3L1P16619 93 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 INPP1P49441 399 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 ARPC4P59998 168 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 ABHD1Q96SE0 405 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 PCGF1Q9BSM1 259 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 ZNF230Q9UIE0 474 aaPredicted RBP13.88□□□□□ -0.19
CCM2-205ENST00000472223 CREBBPQ92793 2442 aa13.88□□□□□ -0.19
CCM2-205ENST00000472223 VPS13CQ709C8 3753 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 MEIS3P1A6NDR6 274 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 C17orf98A8MV24 154 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 HSPA12AO43301 675 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 CTXN2P0C2S0 81 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 NFYBP25208 207 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 HLA-DRB3P79483 266 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 GUCA2AQ02747 115 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 PAX2Q02962 417 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 SSBP1Q04837 148 aaKnown RBP13.87□□□□□ -0.19
CCM2-205ENST00000472223 PAX8Q06710 450 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 CHRFAM7AQ494W8 412 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 RNASE12Q5GAN4 147 aaKnown RBP13.87□□□□□ -0.19
CCM2-205ENST00000472223 NCR3LG1Q68D85 454 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 ZNF880Q6PDB4 577 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 HEPN1Q6WQI6 88 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 HOGA1Q86XE5 327 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 BEST4Q8NFU0 473 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 RFESDQ8TAC1 157 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 IL1F10Q8WWZ1 152 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 WDR12Q9GZL7 423 aaKnown RBP13.87□□□□□ -0.19
CCM2-205ENST00000472223 HEXA-AS1Q9H8Q6 139 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 TAS2R8Q9NYW2 309 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 IDI2-AS1Q9NZ38 188 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 ARHGAP32A7KAX9 2087 aa13.87□□□□□ -0.19
CCM2-205ENST00000472223 MED13LQ71F56 2210 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 C12orf77C9JDV5 145 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 SDCBPO00560 298 aaPredicted RBP13.86□□□□□ -0.19
CCM2-205ENST00000472223 FABP7O15540 132 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 SSX5O60225 188 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 RGS11O94810 467 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 HBZP02008 142 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 GSTT2BP0CG30 244 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 FPR2P25090 351 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 RCVRNP35243 200 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 SSTR5P35346 364 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 OR3A3P47888 321 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 LTC4SQ16873 150 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 STEAP3Q658P3 488 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 Q6ZS49 121 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 Q8N402 240 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 GDPD1Q8N9F7 314 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 OR4A4PQ8NGN8 299 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 OR13D1Q8NGV5 346 aa13.86□□□□□ -0.19
CCM2-205ENST00000472223 GPX8Q8TED1 209 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms