RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 COMMD1Q8N668 190 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 GATD1Q8NB37 220 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 GPX8Q8TED1 209 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 GLYATL2Q8WU03 294 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 CERS2Q96G23 380 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 CENPNQ96H22 339 aaPredicted RBP0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 BCL2L14Q9BZR8 327 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 NXF2Q9GZY0 626 aaKnown RBP0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 BABAM2Q9NXR7 383 aa0.22□□□□□ -2.37
PRPF40A-207ENST00000471701 TVP23AA6NH52 213 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 SEC14L6B5MCN3 397 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 K7EN84 100 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 AKR7A2O43488 359 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 NQO1P15559 274 aaKnown RBP0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 GABRA3P34903 492 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 LPAR6P43657 344 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 TAL2Q16559 108 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF791Q3KP31 576 aaPredicted RBP0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 HES3Q5TGS1 186 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 AGTRAPQ6RW13 159 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 CCDC121Q6ZUS5 278 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF283Q8N7M2 679 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 FAM184AQ8NB25 1140 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 C16orf78Q8WTQ4 265 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 FAM131CQ96AQ9 280 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 UPK3BQ9BT76 320 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF426Q9BUY5 554 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 IL22Q9GZX6 179 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 TXNL4BQ9NX01 149 aaKnown RBP0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 NDUFB11Q9NX14 153 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 WASHC3Q9Y3C0 194 aa0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 TBL2Q9Y4P3 447 aaKnown RBP0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 ZFHX2Q9C0A1 2572 aaPredicted RBP0.21□□□□□ -2.38
PRPF40A-207ENST00000471701 NEURL4Q96JN8 1562 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 LAMB4A4D0S4 1761 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 IGKV1-9A0A0C4DH69 117 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF593O00488 134 aaPredicted RBP0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 CASQ2O14958 399 aaPredicted RBP0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 GATCO43716 136 aaKnown RBP0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 SPOPO43791 374 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 LTAP01374 205 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 RHOAP61586 193 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 BSPH1Q075Z2 132 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 Q6ZTI0 123 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 KRTAP19-3Q7Z4W3 81 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 C10orf107Q8IVU9 208 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 SLC35F6Q8N357 371 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 CASTOR1Q8WTX7 329 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 RNF133Q8WVZ7 376 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 MRPS24Q96EL2 167 aaKnown RBP0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 GLT1D1Q96MS3 346 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 CHID1Q9BWS9 393 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF471Q9BX82 626 aaPredicted RBP0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 SMDT1Q9H4I9 107 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 DNAJC27Q9NZQ0 273 aa0.2□□□□□ -2.38
PRPF40A-207ENST00000471701 DISP1Q96F81 1524 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 IGKV3D-7A0A0C4DH55 119 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 IGKV3OR2-268A0A0C4DH90 116 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 DHRS12A0PJE2 317 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 TMEM250H0YL14 139 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 PDCD6O75340 191 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 CD8AP01732 235 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 GTF2H1P32780 548 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 RPL14P50914 215 aaKnown RBP0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 RAP1GDS1P52306 607 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 PSMC5P62195 406 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 DEFB115Q30KQ5 88 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 TRIML2Q8N7C3 387 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 FBXO36Q8NEA4 188 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 OR5T3Q8NGG3 340 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 OR51Q1Q8NH59 317 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 MBOAT7Q96N66 472 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF396Q96N95 335 aaPredicted RBP0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 VAT1Q99536 393 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 ACOT13Q9NPJ3 140 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 DIABLOQ9NR28 239 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 PSMD13Q9UNM6 376 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 KPTNQ9Y664 436 aa0.19□□□□□ -2.38
PRPF40A-207ENST00000471701 C11orf86A6NJI1 115 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 DENRO43583 198 aaKnown RBP0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 LY6HO94772 140 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 ANXA8P13928 327 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 CD200P41217 278 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 GCLMP48507 274 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 PLCXD2Q0VAA5 305 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 ANXA8L1Q5VT79 327 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 UNQ6190/PRO20217Q6UXQ8 127 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 OLIG3Q7RTU3 272 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 DRAXINQ8NBI3 349 aaPredicted RBP0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF707Q96C28 371 aaPredicted RBP0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 CRLF2Q9HC73 371 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 LZTFL1Q9NQ48 299 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 GPR98Q8WXG9 6306 aa0.18□□□□□ -2.38
PRPF40A-207ENST00000471701 CLUHO75153 1309 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 IGKV3-7A0A075B6H7 116 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 IGKV2D-26A0A0A0MRZ7 120 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 IGHV3-15A0A0B4J1V0 119 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 TRBV6-5A0A0K0K1A5 114 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 C9J4A7 227 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 FGF4P08620 206 aa0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms