RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TAF9BQ9HBM6 251 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 ABCB10Q9NRK6 738 aa15.83■□□□□ 0.12
PSPC1-203ENST00000471658 NOTCH2Q04721 2471 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 TRGV10A0A0A0MS01 117 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 PPIAL4CA0A0B4J2A2 164 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 LINC00854A0A1B0GVQ3 168 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 A0A1W2PQ09 198 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 hADV38S2A0JD32 116 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 PPIAL4GP0DN37 164 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 NAT1P18440 290 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 C17orf58Q2M2W7 97 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 CR1LQ2VPA4 569 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 FAM53AQ6NSI3 398 aaPredicted RBP15.82■□□□□ 0.12
PSPC1-203ENST00000471658 CIARTQ8N365 385 aaPredicted RBP15.82■□□□□ 0.12
PSPC1-203ENST00000471658 ZNF565Q8N9K5 539 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 LY6G5BQ8NDX9 201 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 OR1L1Q8NH94 360 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 CORO2AQ92828 525 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 MMP26Q9NRE1 261 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 OR6C3Q9NZP0 311 aa15.82■□□□□ 0.12
PSPC1-203ENST00000471658 DOCK11Q5JSL3 2073 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 TRBV23-1A0A0A0MS06 115 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 A8MXK9 166 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 TRDCB7Z8K6 153 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 C15orf65H3BRN8 121 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 OMGP23515 440 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 RCVRNP35243 200 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 PAX2Q02962 417 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 HMGN3Q15651 99 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 C8orf46Q8TAG6 207 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 ARL11Q969Q4 196 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 CCDC32Q9BV29 185 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 ZNF286AQ9HBT8 521 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 LINC00312Q9Y6C7 94 aa15.81■□□□□ 0.12
PSPC1-203ENST00000471658 IGKV1-6A0A0C4DH72 117 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 CYSRT1A8MQ03 144 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 MMP23AO75900 390 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 ECDO95905 644 aaPredicted RBP15.8■□□□□ 0.12
PSPC1-203ENST00000471658 HBZP02008 142 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 PMP2P02689 132 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 CD3DP04234 171 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 HEXAP06865 529 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 HLA-DRB3P79483 266 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 LTC4SQ16873 150 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 IGSF11Q5DX21 431 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 CD276Q5ZPR3 534 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 TRIQKQ629K1 86 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 Q6ZS49 121 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 MOB1BQ7L9L4 216 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 CALYQ9NYX4 217 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 KCNIP1Q9NZI2 227 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 ANXA10Q9UJ72 324 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 DSCAML1Q8TD84 2053 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 ABCA2Q9BZC7 2435 aa15.8■□□□□ 0.12
PSPC1-203ENST00000471658 ANKRD20A5PA0PJZ0 165 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 M0QYG6 137 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 FABP7O15540 132 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 FOXH1O75593 365 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 UPK1BO75841 260 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 GZMHP20718 246 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 DLX6P56179 175 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 ACTBP60709 375 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 ACTG1P63261 375 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 HERPUD1Q15011 391 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 SRSF7Q16629 238 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■■■■□ 21
PSPC1-203ENST00000471658 C6orf183Q5T699 404 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 ZNF57Q68EA5 555 aaPredicted RBP15.79■□□□□ 0.12
PSPC1-203ENST00000471658 TMEM229BQ8NBD8 167 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 OR4D10Q8NGI6 311 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 DACT3Q96B18 629 aaPredicted RBP15.79■□□□□ 0.12
PSPC1-203ENST00000471658 KIRREL1Q96J84 757 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 UBE2J1Q9Y385 318 aaPredicted RBP15.79■□□□□ 0.12
PSPC1-203ENST00000471658 KBTBD11-OT1A0A1B0GTJ5 212 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 RFX2P48378 723 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 KLF9Q13886 244 aaPredicted RBP15.79■□□□□ 0.12
PSPC1-203ENST00000471658 UTF1Q5T230 341 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 FAAP20Q6NZ36 180 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 C11orf42Q8N5U0 333 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 IL1F10Q8WWZ1 152 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 ZNF714Q96N38 554 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 LPAR3Q9UBY5 353 aa15.79■□□□□ 0.12
PSPC1-203ENST00000471658 KIR2DS1A0A191URI9 304 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 POM121CA8CG34 1229 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 SDCBPO00560 298 aaPredicted RBP15.78■□□□□ 0.12
PSPC1-203ENST00000471658 ZNF728P0DKX0 622 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 HRH1P35367 487 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 KIR2DS4P43632 304 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 DLX1P56177 255 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 ARF6P62330 175 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 SSBP1Q04837 148 aaKnown RBP15.78■□□□□ 0.12
PSPC1-203ENST00000471658 KIR2DS1Q14954 304 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 CHRFAM7AQ494W8 412 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 PRAMEF5Q5TYX0 476 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 STEAP3Q658P3 488 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 TOMM5Q8N4H5 51 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 OR5AP2Q8NGF4 316 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 BORCS5Q969J3 196 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 C1orf159Q96HA4 380 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 TINAGL1Q9GZM7 467 aaPredicted RBP15.78■□□□□ 0.12
PSPC1-203ENST00000471658 TAS2R3Q9NYW6 316 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms