RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TMEM80Q96HE8 168 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 OR2M2Q96R28 347 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 COPS4Q9BT78 406 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 EMC6Q9BV81 110 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 ST6GALNAC5Q9BVH7 336 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 HCAR1Q9BXC0 346 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 CDCA4Q9BXL8 241 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 RACGAP1Q9H0H5 632 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 SYT4Q9H2B2 425 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 NEK6Q9HC98 313 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 FGF20Q9NP95 211 aaPredicted RBP3.74□□□□□ -1.81
CCDC39-202ENST00000471307 INPP5EQ9NRR6 644 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 FKBP14Q9NWM8 211 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 DNAJC27Q9NZQ0 273 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 CHTOPQ9Y3Y2 248 aaKnown RBP3.74□□□□□ -1.81
CCDC39-202ENST00000471307 EPG5Q9HCE0 2579 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 NCOA6Q14686 2063 aaPredicted RBP3.74□□□□□ -1.81
CCDC39-202ENST00000471307 IGSF10Q6WRI0 2623 aa3.74□□□□□ -1.81
CCDC39-202ENST00000471307 KALRNO60229 2985 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 MYO7BQ6PIF6 2116 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 NBASA2RRP1 2371 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 IGLV1-36A0A0B4J1U3 117 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 CCDC182A6NF36 153 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 J3QRE1 110 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 DCTN6O00399 190 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 SLC19A2O60779 497 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 RAB36O95755 333 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 GYPBP06028 91 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 CDK1P06493 297 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 CTLA4P16410 223 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF823P16415 610 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 MYL12AP19105 171 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 NPR2P20594 1047 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 LAP3P28838 519 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 AGTR1P30556 359 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 PYCR1P32322 319 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 MFAP2P55001 183 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 LSM6P62312 80 aaKnown RBP3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ACTC1P68032 377 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ACTA1P68133 377 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 GUSBP1Q15486 140 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 TEX30Q5JUR7 227 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 C10orf128Q5T292 105 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 C1orf185Q5T7R7 199 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 LINC01590Q5TEZ4 76 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 FAM27BQ5VT28 67 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 FBXW9Q5XUX1 488 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 C16orf87Q6PH81 154 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF773Q6PK81 442 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 AHSA2Q719I0 299 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF100Q8IYN0 542 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ACBD7Q8N6N7 88 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 NOXO1Q8NFA2 376 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 OR52I1Q8NGK6 324 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 OR5D13Q8NGL4 314 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 OR6K6Q8NGW6 343 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 OR6K3Q8NGY3 331 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 GIMAP1Q8WWP7 306 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 APH1AQ96BI3 265 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ZMYND19Q96E35 227 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-202ENST00000471307 SDSLQ96GA7 329 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 MRPL48Q96GC5 212 aaKnown RBP3.73□□□□□ -1.81
CCDC39-202ENST00000471307 CNN2Q99439 309 aaKnown RBP3.73□□□□□ -1.81
CCDC39-202ENST00000471307 SDHCQ99643 169 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-202ENST00000471307 CHRDL1Q9BU40 450 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 MRPS26Q9BYN8 205 aaKnown RBP3.73□□□□□ -1.81
CCDC39-202ENST00000471307 YIPF3Q9GZM5 350 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 CCDC90BQ9GZT6 254 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 RERGLQ9H628 205 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 Q9HAA7 133 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 SIAEQ9HAT2 523 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ADGRL4Q9HBW9 690 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 VCX3AQ9NNX9 186 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 UFSP2Q9NUQ7 469 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 PAK1IP1Q9NWT1 392 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ERGIC3Q9Y282 383 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 EXOSC1Q9Y3B2 195 aaKnown RBP3.73□□□□□ -1.81
CCDC39-202ENST00000471307 TMEM14AQ9Y6G1 99 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 PCNX1Q96RV3 2341 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 SHANK1Q9Y566 2161 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 ESPL1Q14674 2120 aa3.73□□□□□ -1.81
CCDC39-202ENST00000471307 IGKV1D-43A0A0B4J1Z2 117 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 SERTM2A0A1B0GWG4 89 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 DAPL1A0PJW8 107 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 C12orf71A8MTZ7 269 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF99A8MXY4 864 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF670-ZNF695F2Z2N8 137 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 H0YL77 283 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 BOLA2-SMG1P6H3BVE0 249 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 H7C1C5 153 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ZNF593O00488 134 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-202ENST00000471307 PHYHO14832 338 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 CASKO14936 926 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 UPK3AO75631 287 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 S100A9P06702 114 aaKnown RBP3.72□□□□□ -1.81
CCDC39-202ENST00000471307 STSP08842 583 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 HTR1AP08908 422 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 TACSTD2P09758 323 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ANXA3P12429 323 aa3.72□□□□□ -1.81
CCDC39-202ENST00000471307 ALOX5APP20292 161 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms